mirror of
https://github.com/ClusterCockpit/cc-metric-store.git
synced 2025-02-04 18:15:17 +01:00
Continue restructuring. Intermediate state.
This commit is contained in:
parent
e1e6694656
commit
b2528f958c
@ -16,13 +16,13 @@ import (
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"github.com/ClusterCockpit/cc-metric-store/internal/api"
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"github.com/ClusterCockpit/cc-metric-store/internal/config"
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"github.com/ClusterCockpit/cc-metric-store/internal/memstore"
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"github.com/ClusterCockpit/cc-metric-store/internal/memorystore"
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"github.com/google/gops/agent"
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)
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var (
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conf config.Config
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memoryStore *memstore.MemoryStore = nil
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ms *memorystore.MemoryStore = nil
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lastCheckpoint time.Time
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)
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@ -64,7 +64,7 @@ func intervals(wg *sync.WaitGroup, ctx context.Context) {
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case <-ticks:
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t := time.Now().Add(-d)
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log.Printf("start freeing buffers (older than %s)...\n", t.Format(time.RFC3339))
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freed, err := memoryStore.Free(nil, t.Unix())
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freed, err := ms.Free(nil, t.Unix())
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if err != nil {
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log.Printf("freeing up buffers failed: %s\n", err.Error())
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} else {
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@ -93,7 +93,7 @@ func intervals(wg *sync.WaitGroup, ctx context.Context) {
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case <-ticks:
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log.Printf("start checkpointing (starting at %s)...\n", lastCheckpoint.Format(time.RFC3339))
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now := time.Now()
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n, err := memoryStore.ToCheckpoint(conf.Checkpoints.RootDir,
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n, err := ms.ToCheckpoint(conf.Checkpoints.RootDir,
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lastCheckpoint.Unix(), now.Unix())
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if err != nil {
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log.Printf("checkpointing failed: %s\n", err.Error())
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@ -123,7 +123,7 @@ func intervals(wg *sync.WaitGroup, ctx context.Context) {
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case <-ticks:
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t := time.Now().Add(-d)
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log.Printf("start archiving checkpoints (older than %s)...\n", t.Format(time.RFC3339))
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n, err := memstore.ArchiveCheckpoints(conf.Checkpoints.RootDir, conf.Archive.RootDir, t.Unix(), conf.Archive.DeleteInstead)
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n, err := memorystore.ArchiveCheckpoints(conf.Checkpoints.RootDir, conf.Archive.RootDir, t.Unix(), conf.Archive.DeleteInstead)
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if err != nil {
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log.Printf("archiving failed: %s\n", err.Error())
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} else {
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@ -143,7 +143,8 @@ func main() {
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startupTime := time.Now()
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conf = config.LoadConfiguration(configFile)
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memoryStore = memstore.NewMemoryStore(conf.Metrics)
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memorystore.Init(conf.Metrics)
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ms = memorystore.GetMemoryStore()
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if enableGopsAgent || conf.Debug.EnableGops {
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if err := agent.Listen(agent.Options{}); err != nil {
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@ -167,8 +168,8 @@ func main() {
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restoreFrom := startupTime.Add(-d)
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log.Printf("Loading checkpoints newer than %s\n", restoreFrom.Format(time.RFC3339))
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files, err := memoryStore.FromCheckpoint(conf.Checkpoints.RootDir, restoreFrom.Unix())
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loadedData := memoryStore.SizeInBytes() / 1024 / 1024 // In MB
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files, err := ms.FromCheckpoint(conf.Checkpoints.RootDir, restoreFrom.Unix())
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loadedData := ms.SizeInBytes() / 1024 / 1024 // In MB
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if err != nil {
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log.Fatalf("Loading checkpoints failed: %s\n", err.Error())
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} else {
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@ -195,7 +196,7 @@ func main() {
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for {
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sig := <-sigs
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if sig == syscall.SIGUSR1 {
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memoryStore.DebugDump(bufio.NewWriter(os.Stdout), nil)
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ms.DebugDump(bufio.NewWriter(os.Stdout), nil)
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continue
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}
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@ -223,7 +224,7 @@ func main() {
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nc := natsConf
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go func() {
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// err := ReceiveNats(conf.Nats, decodeLine, runtime.NumCPU()-1, ctx)
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err := api.ReceiveNats(nc, decodeLine, 1, ctx)
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err := api.ReceiveNats(nc, ms, 1, ctx)
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if err != nil {
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log.Fatal(err)
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}
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@ -235,7 +236,7 @@ func main() {
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wg.Wait()
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log.Printf("Writing to '%s'...\n", conf.Checkpoints.RootDir)
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files, err = memoryStore.ToCheckpoint(conf.Checkpoints.RootDir, lastCheckpoint.Unix(), time.Now().Unix())
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files, err = ms.ToCheckpoint(conf.Checkpoints.RootDir, lastCheckpoint.Unix(), time.Now().Unix())
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if err != nil {
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log.Printf("Writing checkpoint failed: %s\n", err.Error())
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}
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@ -17,19 +17,22 @@ import (
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"sync"
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"time"
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"github.com/ClusterCockpit/cc-metric-store/internal/config"
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"github.com/ClusterCockpit/cc-metric-store/internal/memorystore"
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"github.com/ClusterCockpit/cc-metric-store/internal/util"
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"github.com/golang-jwt/jwt/v4"
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"github.com/gorilla/mux"
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"github.com/influxdata/line-protocol/v2/lineprotocol"
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)
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type ApiMetricData struct {
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Error *string `json:"error,omitempty"`
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From int64 `json:"from"`
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To int64 `json:"to"`
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Data FloatArray `json:"data,omitempty"`
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Avg Float `json:"avg"`
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Min Float `json:"min"`
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Max Float `json:"max"`
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Error *string `json:"error,omitempty"`
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From int64 `json:"from"`
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To int64 `json:"to"`
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Data util.FloatArray `json:"data,omitempty"`
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Avg util.Float `json:"avg"`
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Min util.Float `json:"min"`
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Max util.Float `json:"max"`
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}
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// TODO: Optimize this, just like the stats endpoint!
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@ -49,15 +52,15 @@ func (data *ApiMetricData) AddStats() {
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if n > 0 {
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avg := sum / float64(n)
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data.Avg = Float(avg)
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data.Min = Float(min)
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data.Max = Float(max)
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data.Avg = util.Float(avg)
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data.Min = util.Float(min)
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data.Max = util.Float(max)
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} else {
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data.Avg, data.Min, data.Max = NaN, NaN, NaN
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data.Avg, data.Min, data.Max = util.NaN, util.NaN, util.NaN
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}
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}
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func (data *ApiMetricData) ScaleBy(f Float) {
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func (data *ApiMetricData) ScaleBy(f util.Float) {
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if f == 0 || f == 1 {
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return
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}
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@ -78,9 +81,9 @@ func (data *ApiMetricData) PadDataWithNull(from, to int64, metric string) {
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if (data.From / minfo.Frequency) > (from / minfo.Frequency) {
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padfront := int((data.From / minfo.Frequency) - (from / minfo.Frequency))
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ndata := make([]Float, 0, padfront+len(data.Data))
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ndata := make([]util.Float, 0, padfront+len(data.Data))
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for i := 0; i < padfront; i++ {
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ndata = append(ndata, NaN)
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ndata = append(ndata, util.NaN)
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}
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for j := 0; j < len(data.Data); j++ {
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ndata = append(ndata, data.Data[j])
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@ -212,11 +215,13 @@ func handleQuery(rw http.ResponseWriter, r *http.Request) {
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return
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}
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ms := memorystore.GetMemoryStore()
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response := ApiQueryResponse{
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Results: make([][]ApiMetricData, 0, len(req.Queries)),
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}
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if req.ForAllNodes != nil {
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nodes := memoryStore.ListChildren([]string{req.Cluster})
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nodes := ms.ListChildren([]string{req.Cluster})
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for _, node := range nodes {
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for _, metric := range req.ForAllNodes {
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q := ApiQuery{
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@ -364,7 +369,7 @@ func authentication(next http.Handler, publicKey ed25519.PublicKey) http.Handler
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})
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}
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func StartApiServer(ctx context.Context, httpConfig *HttpConfig) error {
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func StartApiServer(ctx context.Context, httpConfig *config.HttpConfig) error {
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r := mux.NewRouter()
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r.HandleFunc("/api/free", handleFree)
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@ -10,21 +10,17 @@ import (
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"time"
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"github.com/ClusterCockpit/cc-metric-store/internal/config"
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"github.com/ClusterCockpit/cc-metric-store/internal/memstore"
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"github.com/ClusterCockpit/cc-metric-store/internal/memorystore"
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"github.com/ClusterCockpit/cc-metric-store/internal/util"
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"github.com/influxdata/line-protocol/v2/lineprotocol"
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"github.com/nats-io/nats.go"
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)
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type Metric struct {
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Name string
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Value util.Float
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mc config.MetricConfig
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}
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// Currently unused, could be used to send messages via raw TCP.
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// Each connection is handled in it's own goroutine. This is a blocking function.
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func ReceiveRaw(ctx context.Context, listener net.Listener, handleLine func(*lineprotocol.Decoder, string) error) error {
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func ReceiveRaw(ctx context.Context,
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listener net.Listener,
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handleLine func(*lineprotocol.Decoder, string) error,
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) error {
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var wg sync.WaitGroup
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wg.Add(1)
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@ -86,7 +82,11 @@ func ReceiveRaw(ctx context.Context, listener net.Listener, handleLine func(*lin
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// Connect to a nats server and subscribe to "updates". This is a blocking
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// function. handleLine will be called for each line recieved via nats.
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// Send `true` through the done channel for gracefull termination.
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func ReceiveNats(conf *config.NatsConfig, handleLine func(*lineprotocol.Decoder, string) error, workers int, ctx context.Context) error {
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func ReceiveNats(conf *config.NatsConfig,
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ms *memorystore.MemoryStore,
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workers int,
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ctx context.Context,
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) error {
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var opts []nats.Option
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if conf.Username != "" && conf.Password != "" {
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opts = append(opts, nats.UserInfo(conf.Username, conf.Password))
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@ -113,7 +113,7 @@ func ReceiveNats(conf *config.NatsConfig, handleLine func(*lineprotocol.Decoder,
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go func() {
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for m := range msgs {
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dec := lineprotocol.NewDecoderWithBytes(m.Data)
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if err := handleLine(dec, clusterTag); err != nil {
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if err := decodeLine(dec, ms, clusterTag); err != nil {
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log.Printf("error: %s\n", err.Error())
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}
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}
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@ -128,7 +128,7 @@ func ReceiveNats(conf *config.NatsConfig, handleLine func(*lineprotocol.Decoder,
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} else {
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sub, err = nc.Subscribe(sc.SubscribeTo, func(m *nats.Msg) {
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dec := lineprotocol.NewDecoderWithBytes(m.Data)
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if err := handleLine(dec, clusterTag); err != nil {
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if err := decodeLine(dec, ms, clusterTag); err != nil {
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log.Printf("error: %s\n", err.Error())
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}
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})
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@ -177,17 +177,20 @@ func reorder(buf, prefix []byte) []byte {
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// Decode lines using dec and make write calls to the MemoryStore.
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// If a line is missing its cluster tag, use clusterDefault as default.
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func decodeLine(dec *lineprotocol.Decoder, memoryStore *memstore.MemoryStore, clusterDefault string) error {
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func decodeLine(dec *lineprotocol.Decoder,
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ms *memorystore.MemoryStore,
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clusterDefault string,
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) error {
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// Reduce allocations in loop:
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t := time.Now()
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metric, metricBuf := Metric{}, make([]byte, 0, 16)
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metric, metricBuf := memorystore.Metric{}, make([]byte, 0, 16)
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selector := make([]string, 0, 4)
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typeBuf, subTypeBuf := make([]byte, 0, 16), make([]byte, 0)
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// Optimize for the case where all lines in a "batch" are about the same
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// cluster and host. By using `WriteToLevel` (level = host), we do not need
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// to take the root- and cluster-level lock as often.
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var lvl *level = nil
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var lvl *memorystore.Level = nil
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var prevCluster, prevHost string = "", ""
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var ok bool
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@ -202,7 +205,7 @@ func decodeLine(dec *lineprotocol.Decoder, memoryStore *memstore.MemoryStore, cl
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metricBuf = append(metricBuf[:0], rawmeasurement...)
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// The go compiler optimizes map[string(byteslice)] lookups:
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metric.mc, ok = memoryStore.metrics[string(rawmeasurement)]
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metric.MetricConfig, ok = ms.Metrics[string(rawmeasurement)]
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if !ok {
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continue
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}
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@ -266,7 +269,7 @@ func decodeLine(dec *lineprotocol.Decoder, memoryStore *memstore.MemoryStore, cl
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if lvl == nil {
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selector = selector[:2]
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selector[0], selector[1] = cluster, host
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lvl = memoryStore.GetLevel(selector)
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lvl = ms.GetLevel(selector)
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prevCluster, prevHost = cluster, host
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}
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@ -308,7 +311,7 @@ func decodeLine(dec *lineprotocol.Decoder, memoryStore *memstore.MemoryStore, cl
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return err
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}
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if err := memoryStore.WriteToLevel(lvl, selector, t.Unix(), []Metric{metric}); err != nil {
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if err := ms.WriteToLevel(lvl, selector, t.Unix(), []memorystore.Metric{metric}); err != nil {
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return err
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}
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}
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@ -43,7 +43,7 @@ type MetricConfig struct {
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Aggregation AggregationStrategy `json:"aggregation"`
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// Private, used internally...
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offset int
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Offset int
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}
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type HttpConfig struct {
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@ -1,4 +1,4 @@
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package memstore
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package memorystore
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import (
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"archive/zip"
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@ -75,7 +75,7 @@ func init() {
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// The good thing: Only a host at a time is locked, so this function can run
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// in parallel to writes/reads.
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func (m *MemoryStore) ToCheckpoint(dir string, from, to int64) (int, error) {
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levels := make([]*level, 0)
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levels := make([]*Level, 0)
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selectors := make([][]string, 0)
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m.root.lock.RLock()
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for sel1, l1 := range m.root.children {
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@ -89,7 +89,7 @@ func (m *MemoryStore) ToCheckpoint(dir string, from, to int64) (int, error) {
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m.root.lock.RUnlock()
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type workItem struct {
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level *level
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level *Level
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dir string
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selector []string
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}
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@ -136,7 +136,7 @@ func (m *MemoryStore) ToCheckpoint(dir string, from, to int64) (int, error) {
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return int(n), nil
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}
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func (l *level) toCheckpointFile(from, to int64, m *MemoryStore) (*CheckpointFile, error) {
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func (l *Level) toCheckpointFile(from, to int64, m *MemoryStore) (*CheckpointFile, error) {
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l.lock.RLock()
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defer l.lock.RUnlock()
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@ -147,7 +147,7 @@ func (l *level) toCheckpointFile(from, to int64, m *MemoryStore) (*CheckpointFil
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Children: make(map[string]*CheckpointFile),
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}
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for metric, minfo := range m.metrics {
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for metric, minfo := range m.Metrics {
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b := l.metrics[minfo.offset]
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if b == nil {
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continue
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@ -200,7 +200,7 @@ func (l *level) toCheckpointFile(from, to int64, m *MemoryStore) (*CheckpointFil
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return retval, nil
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}
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func (l *level) toCheckpoint(dir string, from, to int64, m *MemoryStore) error {
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func (l *Level) toCheckpoint(dir string, from, to int64, m *MemoryStore) error {
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cf, err := l.toCheckpointFile(from, to, m)
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if err != nil {
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return err
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@ -211,11 +211,11 @@ func (l *level) toCheckpoint(dir string, from, to int64, m *MemoryStore) error {
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}
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filepath := path.Join(dir, fmt.Sprintf("%d.json", from))
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f, err := os.OpenFile(filepath, os.O_CREATE|os.O_WRONLY, 0644)
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f, err := os.OpenFile(filepath, os.O_CREATE|os.O_WRONLY, 0o644)
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if err != nil && os.IsNotExist(err) {
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err = os.MkdirAll(dir, 0755)
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err = os.MkdirAll(dir, 0o755)
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if err == nil {
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f, err = os.OpenFile(filepath, os.O_CREATE|os.O_WRONLY, 0644)
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f, err = os.OpenFile(filepath, os.O_CREATE|os.O_WRONLY, 0o644)
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}
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}
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if err != nil {
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@ -244,7 +244,7 @@ func (m *MemoryStore) FromCheckpoint(dir string, from int64) (int, error) {
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go func() {
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defer wg.Done()
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for host := range work {
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lvl := m.root.findLevelOrCreate(host[:], len(m.metrics))
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lvl := m.root.findLevelOrCreate(host[:], len(m.Metrics))
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nn, err := lvl.fromCheckpoint(filepath.Join(dir, host[0], host[1]), from, m)
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if err != nil {
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log.Fatalf("error while loading checkpoints: %s", err.Error())
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@ -302,7 +302,7 @@ done:
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return int(n), nil
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}
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func (l *level) loadFile(cf *CheckpointFile, m *MemoryStore) error {
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func (l *Level) loadFile(cf *CheckpointFile, m *MemoryStore) error {
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for name, metric := range cf.Metrics {
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n := len(metric.Data)
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b := &buffer{
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@ -315,7 +315,7 @@ func (l *level) loadFile(cf *CheckpointFile, m *MemoryStore) error {
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}
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b.close()
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minfo, ok := m.metrics[name]
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minfo, ok := m.Metrics[name]
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if !ok {
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continue
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// return errors.New("Unkown metric: " + name)
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@ -336,14 +336,14 @@ func (l *level) loadFile(cf *CheckpointFile, m *MemoryStore) error {
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}
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if len(cf.Children) > 0 && l.children == nil {
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l.children = make(map[string]*level)
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l.children = make(map[string]*Level)
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}
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for sel, childCf := range cf.Children {
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child, ok := l.children[sel]
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if !ok {
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child = &level{
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metrics: make([]*buffer, len(m.metrics)),
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child = &Level{
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metrics: make([]*buffer, len(m.Metrics)),
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children: nil,
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}
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l.children[sel] = child
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@ -357,7 +357,7 @@ func (l *level) loadFile(cf *CheckpointFile, m *MemoryStore) error {
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return nil
|
||||
}
|
||||
|
||||
func (l *level) fromCheckpoint(dir string, from int64, m *MemoryStore) (int, error) {
|
||||
func (l *Level) fromCheckpoint(dir string, from int64, m *MemoryStore) (int, error) {
|
||||
direntries, err := os.ReadDir(dir)
|
||||
if err != nil {
|
||||
if os.IsNotExist(err) {
|
||||
@ -371,9 +371,9 @@ func (l *level) fromCheckpoint(dir string, from int64, m *MemoryStore) (int, err
|
||||
filesLoaded := 0
|
||||
for _, e := range direntries {
|
||||
if e.IsDir() {
|
||||
child := &level{
|
||||
metrics: make([]*buffer, len(m.metrics)),
|
||||
children: make(map[string]*level),
|
||||
child := &Level{
|
||||
metrics: make([]*buffer, len(m.Metrics)),
|
||||
children: make(map[string]*Level),
|
||||
}
|
||||
|
||||
files, err := child.fromCheckpoint(path.Join(dir, e.Name()), from, m)
|
||||
@ -553,11 +553,11 @@ func archiveCheckpoints(dir string, archiveDir string, from int64, deleteInstead
|
||||
}
|
||||
|
||||
filename := filepath.Join(archiveDir, fmt.Sprintf("%d.zip", from))
|
||||
f, err := os.OpenFile(filename, os.O_CREATE|os.O_WRONLY, 0644)
|
||||
f, err := os.OpenFile(filename, os.O_CREATE|os.O_WRONLY, 0o644)
|
||||
if err != nil && os.IsNotExist(err) {
|
||||
err = os.MkdirAll(archiveDir, 0755)
|
||||
err = os.MkdirAll(archiveDir, 0o755)
|
||||
if err == nil {
|
||||
f, err = os.OpenFile(filename, os.O_CREATE|os.O_WRONLY, 0644)
|
||||
f, err = os.OpenFile(filename, os.O_CREATE|os.O_WRONLY, 0o644)
|
||||
}
|
||||
}
|
||||
if err != nil {
|
241
internal/memorystore/buffer.go
Normal file
241
internal/memorystore/buffer.go
Normal file
@ -0,0 +1,241 @@
|
||||
package memorystore
|
||||
|
||||
import (
|
||||
"errors"
|
||||
"sync"
|
||||
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/util"
|
||||
)
|
||||
|
||||
// Default buffer capacity.
|
||||
// `buffer.data` will only ever grow up to it's capacity and a new link
|
||||
// in the buffer chain will be created if needed so that no copying
|
||||
// of data or reallocation needs to happen on writes.
|
||||
const (
|
||||
BUFFER_CAP int = 512
|
||||
)
|
||||
|
||||
// So that we can reuse allocations
|
||||
var bufferPool sync.Pool = sync.Pool{
|
||||
New: func() interface{} {
|
||||
return &buffer{
|
||||
data: make([]util.Float, 0, BUFFER_CAP),
|
||||
}
|
||||
},
|
||||
}
|
||||
|
||||
var (
|
||||
ErrNoData error = errors.New("no data for this metric/level")
|
||||
ErrDataDoesNotAlign error = errors.New("data from lower granularities does not align")
|
||||
)
|
||||
|
||||
// Each metric on each level has it's own buffer.
|
||||
// This is where the actual values go.
|
||||
// If `cap(data)` is reached, a new buffer is created and
|
||||
// becomes the new head of a buffer list.
|
||||
type buffer struct {
|
||||
frequency int64 // Time between two "slots"
|
||||
start int64 // Timestamp of when `data[0]` was written.
|
||||
data []util.Float // The slice should never reallocacte as `cap(data)` is respected.
|
||||
prev, next *buffer // `prev` contains older data, `next` newer data.
|
||||
archived bool // If true, this buffer is already archived
|
||||
|
||||
closed bool
|
||||
/*
|
||||
statisticts struct {
|
||||
samples int
|
||||
min Float
|
||||
max Float
|
||||
avg Float
|
||||
}
|
||||
*/
|
||||
}
|
||||
|
||||
func newBuffer(ts, freq int64) *buffer {
|
||||
b := bufferPool.Get().(*buffer)
|
||||
b.frequency = freq
|
||||
b.start = ts - (freq / 2)
|
||||
b.prev = nil
|
||||
b.next = nil
|
||||
b.archived = false
|
||||
b.closed = false
|
||||
b.data = b.data[:0]
|
||||
return b
|
||||
}
|
||||
|
||||
// If a new buffer was created, the new head is returnd.
|
||||
// Otherwise, the existing buffer is returnd.
|
||||
// Normaly, only "newer" data should be written, but if the value would
|
||||
// end up in the same buffer anyways it is allowed.
|
||||
func (b *buffer) write(ts int64, value util.Float) (*buffer, error) {
|
||||
if ts < b.start {
|
||||
return nil, errors.New("cannot write value to buffer from past")
|
||||
}
|
||||
|
||||
// idx := int((ts - b.start + (b.frequency / 3)) / b.frequency)
|
||||
idx := int((ts - b.start) / b.frequency)
|
||||
if idx >= cap(b.data) {
|
||||
newbuf := newBuffer(ts, b.frequency)
|
||||
newbuf.prev = b
|
||||
b.next = newbuf
|
||||
b.close()
|
||||
b = newbuf
|
||||
idx = 0
|
||||
}
|
||||
|
||||
// Overwriting value or writing value from past
|
||||
if idx < len(b.data) {
|
||||
b.data[idx] = value
|
||||
return b, nil
|
||||
}
|
||||
|
||||
// Fill up unwritten slots with NaN
|
||||
for i := len(b.data); i < idx; i++ {
|
||||
b.data = append(b.data, util.NaN)
|
||||
}
|
||||
|
||||
b.data = append(b.data, value)
|
||||
return b, nil
|
||||
}
|
||||
|
||||
func (b *buffer) end() int64 {
|
||||
return b.firstWrite() + int64(len(b.data))*b.frequency
|
||||
}
|
||||
|
||||
func (b *buffer) firstWrite() int64 {
|
||||
return b.start + (b.frequency / 2)
|
||||
}
|
||||
|
||||
func (b *buffer) close() {}
|
||||
|
||||
/*
|
||||
func (b *buffer) close() {
|
||||
if b.closed {
|
||||
return
|
||||
}
|
||||
|
||||
b.closed = true
|
||||
n, sum, min, max := 0, 0., math.MaxFloat64, -math.MaxFloat64
|
||||
for _, x := range b.data {
|
||||
if x.IsNaN() {
|
||||
continue
|
||||
}
|
||||
|
||||
n += 1
|
||||
f := float64(x)
|
||||
sum += f
|
||||
min = math.Min(min, f)
|
||||
max = math.Max(max, f)
|
||||
}
|
||||
|
||||
b.statisticts.samples = n
|
||||
if n > 0 {
|
||||
b.statisticts.avg = Float(sum / float64(n))
|
||||
b.statisticts.min = Float(min)
|
||||
b.statisticts.max = Float(max)
|
||||
} else {
|
||||
b.statisticts.avg = NaN
|
||||
b.statisticts.min = NaN
|
||||
b.statisticts.max = NaN
|
||||
}
|
||||
}
|
||||
*/
|
||||
|
||||
// func interpolate(idx int, data []Float) Float {
|
||||
// if idx == 0 || idx+1 == len(data) {
|
||||
// return NaN
|
||||
// }
|
||||
// return (data[idx-1] + data[idx+1]) / 2.0
|
||||
// }
|
||||
|
||||
// Return all known values from `from` to `to`. Gaps of information are represented as NaN.
|
||||
// Simple linear interpolation is done between the two neighboring cells if possible.
|
||||
// If values at the start or end are missing, instead of NaN values, the second and thrid
|
||||
// return values contain the actual `from`/`to`.
|
||||
// This function goes back the buffer chain if `from` is older than the currents buffer start.
|
||||
// The loaded values are added to `data` and `data` is returned, possibly with a shorter length.
|
||||
// If `data` is not long enough to hold all values, this function will panic!
|
||||
func (b *buffer) read(from, to int64, data []util.Float) ([]util.Float, int64, int64, error) {
|
||||
if from < b.firstWrite() {
|
||||
if b.prev != nil {
|
||||
return b.prev.read(from, to, data)
|
||||
}
|
||||
from = b.firstWrite()
|
||||
}
|
||||
|
||||
var i int = 0
|
||||
var t int64 = from
|
||||
for ; t < to; t += b.frequency {
|
||||
idx := int((t - b.start) / b.frequency)
|
||||
if idx >= cap(b.data) {
|
||||
if b.next == nil {
|
||||
break
|
||||
}
|
||||
b = b.next
|
||||
idx = 0
|
||||
}
|
||||
|
||||
if idx >= len(b.data) {
|
||||
if b.next == nil || to <= b.next.start {
|
||||
break
|
||||
}
|
||||
data[i] += util.NaN
|
||||
} else if t < b.start {
|
||||
data[i] += util.NaN
|
||||
// } else if b.data[idx].IsNaN() {
|
||||
// data[i] += interpolate(idx, b.data)
|
||||
} else {
|
||||
data[i] += b.data[idx]
|
||||
}
|
||||
i++
|
||||
}
|
||||
|
||||
return data[:i], from, t, nil
|
||||
}
|
||||
|
||||
// Returns true if this buffer needs to be freed.
|
||||
func (b *buffer) free(t int64) (delme bool, n int) {
|
||||
if b.prev != nil {
|
||||
delme, m := b.prev.free(t)
|
||||
n += m
|
||||
if delme {
|
||||
b.prev.next = nil
|
||||
if cap(b.prev.data) == BUFFER_CAP {
|
||||
bufferPool.Put(b.prev)
|
||||
}
|
||||
b.prev = nil
|
||||
}
|
||||
}
|
||||
|
||||
end := b.end()
|
||||
if end < t {
|
||||
return true, n + 1
|
||||
}
|
||||
|
||||
return false, n
|
||||
}
|
||||
|
||||
// Call `callback` on every buffer that contains data in the range from `from` to `to`.
|
||||
func (b *buffer) iterFromTo(from, to int64, callback func(b *buffer) error) error {
|
||||
if b == nil {
|
||||
return nil
|
||||
}
|
||||
|
||||
if err := b.prev.iterFromTo(from, to, callback); err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
if from <= b.end() && b.start <= to {
|
||||
return callback(b)
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
|
||||
func (b *buffer) count() int64 {
|
||||
res := int64(len(b.data))
|
||||
if b.prev != nil {
|
||||
res += b.prev.count()
|
||||
}
|
||||
return res
|
||||
}
|
@ -1,4 +1,4 @@
|
||||
package main
|
||||
package memorystore
|
||||
|
||||
import (
|
||||
"bufio"
|
||||
@ -29,7 +29,7 @@ func (b *buffer) debugDump(buf []byte) []byte {
|
||||
return buf
|
||||
}
|
||||
|
||||
func (l *level) debugDump(m *MemoryStore, w *bufio.Writer, lvlname string, buf []byte, depth int) ([]byte, error) {
|
||||
func (l *Level) debugDump(m *MemoryStore, w *bufio.Writer, lvlname string, buf []byte, depth int) ([]byte, error) {
|
||||
l.lock.RLock()
|
||||
defer l.lock.RUnlock()
|
||||
for i := 0; i < depth; i++ {
|
||||
@ -40,7 +40,7 @@ func (l *level) debugDump(m *MemoryStore, w *bufio.Writer, lvlname string, buf [
|
||||
buf = append(buf, "\":{\n"...)
|
||||
depth += 1
|
||||
objitems := 0
|
||||
for name, mc := range m.metrics {
|
||||
for name, mc := range m.Metrics {
|
||||
if b := l.metrics[mc.offset]; b != nil {
|
||||
for i := 0; i < depth; i++ {
|
||||
buf = append(buf, '\t')
|
183
internal/memorystore/level.go
Normal file
183
internal/memorystore/level.go
Normal file
@ -0,0 +1,183 @@
|
||||
package memorystore
|
||||
|
||||
import (
|
||||
"sync"
|
||||
"unsafe"
|
||||
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/util"
|
||||
)
|
||||
|
||||
// Could also be called "node" as this forms a node in a tree structure.
|
||||
// Called Level because "node" might be confusing here.
|
||||
// Can be both a leaf or a inner node. In this tree structue, inner nodes can
|
||||
// also hold data (in `metrics`).
|
||||
type Level struct {
|
||||
lock sync.RWMutex
|
||||
metrics []*buffer // Every level can store metrics.
|
||||
children map[string]*Level // Lower levels.
|
||||
}
|
||||
|
||||
// Find the correct level for the given selector, creating it if
|
||||
// it does not exist. Example selector in the context of the
|
||||
// ClusterCockpit could be: []string{ "emmy", "host123", "cpu0" }.
|
||||
// This function would probably benefit a lot from `level.children` beeing a `sync.Map`?
|
||||
func (l *Level) findLevelOrCreate(selector []string, nMetrics int) *Level {
|
||||
if len(selector) == 0 {
|
||||
return l
|
||||
}
|
||||
|
||||
// Allow concurrent reads:
|
||||
l.lock.RLock()
|
||||
var child *Level
|
||||
var ok bool
|
||||
if l.children == nil {
|
||||
// Children map needs to be created...
|
||||
l.lock.RUnlock()
|
||||
} else {
|
||||
child, ok := l.children[selector[0]]
|
||||
l.lock.RUnlock()
|
||||
if ok {
|
||||
return child.findLevelOrCreate(selector[1:], nMetrics)
|
||||
}
|
||||
}
|
||||
|
||||
// The level does not exist, take write lock for unqiue access:
|
||||
l.lock.Lock()
|
||||
// While this thread waited for the write lock, another thread
|
||||
// could have created the child node.
|
||||
if l.children != nil {
|
||||
child, ok = l.children[selector[0]]
|
||||
if ok {
|
||||
l.lock.Unlock()
|
||||
return child.findLevelOrCreate(selector[1:], nMetrics)
|
||||
}
|
||||
}
|
||||
|
||||
child = &Level{
|
||||
metrics: make([]*buffer, nMetrics),
|
||||
children: nil,
|
||||
}
|
||||
|
||||
if l.children != nil {
|
||||
l.children[selector[0]] = child
|
||||
} else {
|
||||
l.children = map[string]*Level{selector[0]: child}
|
||||
}
|
||||
l.lock.Unlock()
|
||||
return child.findLevelOrCreate(selector[1:], nMetrics)
|
||||
}
|
||||
|
||||
func (l *Level) free(t int64) (int, error) {
|
||||
l.lock.Lock()
|
||||
defer l.lock.Unlock()
|
||||
|
||||
n := 0
|
||||
for i, b := range l.metrics {
|
||||
if b != nil {
|
||||
delme, m := b.free(t)
|
||||
n += m
|
||||
if delme {
|
||||
if cap(b.data) == BUFFER_CAP {
|
||||
bufferPool.Put(b)
|
||||
}
|
||||
l.metrics[i] = nil
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
for _, l := range l.children {
|
||||
m, err := l.free(t)
|
||||
n += m
|
||||
if err != nil {
|
||||
return n, err
|
||||
}
|
||||
}
|
||||
|
||||
return n, nil
|
||||
}
|
||||
|
||||
func (l *Level) sizeInBytes() int64 {
|
||||
l.lock.RLock()
|
||||
defer l.lock.RUnlock()
|
||||
size := int64(0)
|
||||
|
||||
for _, b := range l.metrics {
|
||||
if b != nil {
|
||||
size += b.count() * int64(unsafe.Sizeof(util.Float(0)))
|
||||
}
|
||||
}
|
||||
|
||||
return size
|
||||
}
|
||||
|
||||
func (l *Level) findLevel(selector []string) *Level {
|
||||
if len(selector) == 0 {
|
||||
return l
|
||||
}
|
||||
|
||||
l.lock.RLock()
|
||||
defer l.lock.RUnlock()
|
||||
|
||||
lvl := l.children[selector[0]]
|
||||
if lvl == nil {
|
||||
return nil
|
||||
}
|
||||
|
||||
return lvl.findLevel(selector[1:])
|
||||
}
|
||||
|
||||
func (l *Level) findBuffers(selector Selector, offset int, f func(b *buffer) error) error {
|
||||
l.lock.RLock()
|
||||
defer l.lock.RUnlock()
|
||||
|
||||
if len(selector) == 0 {
|
||||
b := l.metrics[offset]
|
||||
if b != nil {
|
||||
return f(b)
|
||||
}
|
||||
|
||||
for _, lvl := range l.children {
|
||||
err := lvl.findBuffers(nil, offset, f)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
sel := selector[0]
|
||||
if len(sel.String) != 0 && l.children != nil {
|
||||
lvl, ok := l.children[sel.String]
|
||||
if ok {
|
||||
err := lvl.findBuffers(selector[1:], offset, f)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
if sel.Group != nil && l.children != nil {
|
||||
for _, key := range sel.Group {
|
||||
lvl, ok := l.children[key]
|
||||
if ok {
|
||||
err := lvl.findBuffers(selector[1:], offset, f)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
if sel.Any && l.children != nil {
|
||||
for _, lvl := range l.children {
|
||||
if err := lvl.findBuffers(selector[1:], offset, f); err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
222
internal/memorystore/memorystore.go
Normal file
222
internal/memorystore/memorystore.go
Normal file
@ -0,0 +1,222 @@
|
||||
package memorystore
|
||||
|
||||
import (
|
||||
"errors"
|
||||
"log"
|
||||
"sync"
|
||||
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/config"
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/util"
|
||||
)
|
||||
|
||||
var (
|
||||
singleton sync.Once
|
||||
msInstance *MemoryStore
|
||||
)
|
||||
|
||||
type Metric struct {
|
||||
Name string
|
||||
Value util.Float
|
||||
MetricConfig config.MetricConfig
|
||||
}
|
||||
|
||||
type MemoryStore struct {
|
||||
root Level // root of the tree structure
|
||||
Metrics map[string]config.MetricConfig
|
||||
}
|
||||
|
||||
// Create a new, initialized instance of a MemoryStore.
|
||||
// Will panic if values in the metric configurations are invalid.
|
||||
func Init(metrics map[string]config.MetricConfig) {
|
||||
singleton.Do(func() {
|
||||
offset := 0
|
||||
for key, cfg := range metrics {
|
||||
if cfg.Frequency == 0 {
|
||||
panic("invalid frequency")
|
||||
}
|
||||
|
||||
metrics[key] = config.MetricConfig{
|
||||
Frequency: cfg.Frequency,
|
||||
Aggregation: cfg.Aggregation,
|
||||
Offset: offset,
|
||||
}
|
||||
offset += 1
|
||||
}
|
||||
|
||||
msInstance = &MemoryStore{
|
||||
root: Level{
|
||||
metrics: make([]*buffer, len(metrics)),
|
||||
children: make(map[string]*Level),
|
||||
},
|
||||
Metrics: metrics,
|
||||
}
|
||||
})
|
||||
}
|
||||
|
||||
func GetMemoryStore() *MemoryStore {
|
||||
if msInstance == nil {
|
||||
log.Fatalf("MemoryStore not initialized!")
|
||||
}
|
||||
|
||||
return msInstance
|
||||
}
|
||||
|
||||
// Write all values in `metrics` to the level specified by `selector` for time `ts`.
|
||||
// Look at `findLevelOrCreate` for how selectors work.
|
||||
func (m *MemoryStore) Write(selector []string, ts int64, metrics []Metric) error {
|
||||
var ok bool
|
||||
for i, metric := range metrics {
|
||||
if metric.MetricConfig.Frequency == 0 {
|
||||
metric.MetricConfig, ok = m.Metrics[metric.Name]
|
||||
if !ok {
|
||||
metric.MetricConfig.Frequency = 0
|
||||
}
|
||||
metrics[i] = metric
|
||||
}
|
||||
}
|
||||
|
||||
return m.WriteToLevel(&m.root, selector, ts, metrics)
|
||||
}
|
||||
|
||||
func (m *MemoryStore) GetLevel(selector []string) *Level {
|
||||
return m.root.findLevelOrCreate(selector, len(m.Metrics))
|
||||
}
|
||||
|
||||
// Assumes that `minfo` in `metrics` is filled in!
|
||||
func (m *MemoryStore) WriteToLevel(l *Level, selector []string, ts int64, metrics []Metric) error {
|
||||
l = l.findLevelOrCreate(selector, len(m.Metrics))
|
||||
l.lock.Lock()
|
||||
defer l.lock.Unlock()
|
||||
|
||||
for _, metric := range metrics {
|
||||
if metric.MetricConfig.Frequency == 0 {
|
||||
continue
|
||||
}
|
||||
|
||||
b := l.metrics[metric.MetricConfig.Offset]
|
||||
if b == nil {
|
||||
// First write to this metric and level
|
||||
b = newBuffer(ts, metric.MetricConfig.Frequency)
|
||||
l.metrics[metric.MetricConfig.Offset] = b
|
||||
}
|
||||
|
||||
nb, err := b.write(ts, metric.Value)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
// Last write created a new buffer...
|
||||
if b != nb {
|
||||
l.metrics[metric.MetricConfig.Offset] = nb
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
// Returns all values for metric `metric` from `from` to `to` for the selected level(s).
|
||||
// If the level does not hold the metric itself, the data will be aggregated recursively from the children.
|
||||
// The second and third return value are the actual from/to for the data. Those can be different from
|
||||
// the range asked for if no data was available.
|
||||
func (m *MemoryStore) Read(selector Selector, metric string, from, to int64) ([]util.Float, int64, int64, error) {
|
||||
if from > to {
|
||||
return nil, 0, 0, errors.New("invalid time range")
|
||||
}
|
||||
|
||||
minfo, ok := m.Metrics[metric]
|
||||
if !ok {
|
||||
return nil, 0, 0, errors.New("unkown metric: " + metric)
|
||||
}
|
||||
|
||||
n, data := 0, make([]util.Float, (to-from)/minfo.Frequency+1)
|
||||
err := m.root.findBuffers(selector, minfo.Offset, func(b *buffer) error {
|
||||
cdata, cfrom, cto, err := b.read(from, to, data)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
if n == 0 {
|
||||
from, to = cfrom, cto
|
||||
} else if from != cfrom || to != cto || len(data) != len(cdata) {
|
||||
missingfront, missingback := int((from-cfrom)/minfo.Frequency), int((to-cto)/minfo.Frequency)
|
||||
if missingfront != 0 {
|
||||
return ErrDataDoesNotAlign
|
||||
}
|
||||
|
||||
newlen := len(cdata) - missingback
|
||||
if newlen < 1 {
|
||||
return ErrDataDoesNotAlign
|
||||
}
|
||||
cdata = cdata[0:newlen]
|
||||
if len(cdata) != len(data) {
|
||||
return ErrDataDoesNotAlign
|
||||
}
|
||||
|
||||
from, to = cfrom, cto
|
||||
}
|
||||
|
||||
data = cdata
|
||||
n += 1
|
||||
return nil
|
||||
})
|
||||
|
||||
if err != nil {
|
||||
return nil, 0, 0, err
|
||||
} else if n == 0 {
|
||||
return nil, 0, 0, errors.New("metric or host not found")
|
||||
} else if n > 1 {
|
||||
if minfo.Aggregation == config.AvgAggregation {
|
||||
normalize := 1. / util.Float(n)
|
||||
for i := 0; i < len(data); i++ {
|
||||
data[i] *= normalize
|
||||
}
|
||||
} else if minfo.Aggregation != config.SumAggregation {
|
||||
return nil, 0, 0, errors.New("invalid aggregation")
|
||||
}
|
||||
}
|
||||
|
||||
return data, from, to, nil
|
||||
}
|
||||
|
||||
// Release all buffers for the selected level and all its children that contain only
|
||||
// values older than `t`.
|
||||
func (m *MemoryStore) Free(selector []string, t int64) (int, error) {
|
||||
return m.GetLevel(selector).free(t)
|
||||
}
|
||||
|
||||
func (m *MemoryStore) FreeAll() error {
|
||||
for k := range m.root.children {
|
||||
delete(m.root.children, k)
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
|
||||
func (m *MemoryStore) SizeInBytes() int64 {
|
||||
return m.root.sizeInBytes()
|
||||
}
|
||||
|
||||
// Given a selector, return a list of all children of the level selected.
|
||||
func (m *MemoryStore) ListChildren(selector []string) []string {
|
||||
lvl := &m.root
|
||||
for lvl != nil && len(selector) != 0 {
|
||||
lvl.lock.RLock()
|
||||
next := lvl.children[selector[0]]
|
||||
lvl.lock.RUnlock()
|
||||
lvl = next
|
||||
selector = selector[1:]
|
||||
}
|
||||
|
||||
if lvl == nil {
|
||||
return nil
|
||||
}
|
||||
|
||||
lvl.lock.RLock()
|
||||
defer lvl.lock.RUnlock()
|
||||
|
||||
children := make([]string, 0, len(lvl.children))
|
||||
for child := range lvl.children {
|
||||
children = append(children, child)
|
||||
}
|
||||
|
||||
return children
|
||||
}
|
51
internal/memorystore/selector.go
Normal file
51
internal/memorystore/selector.go
Normal file
@ -0,0 +1,51 @@
|
||||
package memorystore
|
||||
|
||||
import (
|
||||
"encoding/json"
|
||||
"errors"
|
||||
)
|
||||
|
||||
type SelectorElement struct {
|
||||
Any bool
|
||||
String string
|
||||
Group []string
|
||||
}
|
||||
|
||||
func (se *SelectorElement) UnmarshalJSON(input []byte) error {
|
||||
if input[0] == '"' {
|
||||
if err := json.Unmarshal(input, &se.String); err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
if se.String == "*" {
|
||||
se.Any = true
|
||||
se.String = ""
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
|
||||
if input[0] == '[' {
|
||||
return json.Unmarshal(input, &se.Group)
|
||||
}
|
||||
|
||||
return errors.New("the Go SelectorElement type can only be a string or an array of strings")
|
||||
}
|
||||
|
||||
func (se *SelectorElement) MarshalJSON() ([]byte, error) {
|
||||
if se.Any {
|
||||
return []byte("\"*\""), nil
|
||||
}
|
||||
|
||||
if se.String != "" {
|
||||
return json.Marshal(se.String)
|
||||
}
|
||||
|
||||
if se.Group != nil {
|
||||
return json.Marshal(se.Group)
|
||||
}
|
||||
|
||||
return nil, errors.New("a Go Selector must be a non-empty string or a non-empty slice of strings")
|
||||
}
|
||||
|
||||
type Selector []SelectorElement
|
@ -1,15 +1,18 @@
|
||||
package util
|
||||
package memorystore
|
||||
|
||||
import (
|
||||
"errors"
|
||||
"math"
|
||||
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/config"
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/util"
|
||||
)
|
||||
|
||||
type Stats struct {
|
||||
Samples int
|
||||
Avg Float
|
||||
Min Float
|
||||
Max Float
|
||||
Avg util.Float
|
||||
Min util.Float
|
||||
Max util.Float
|
||||
}
|
||||
|
||||
func (b *buffer) stats(from, to int64) (Stats, int64, int64, error) {
|
||||
@ -54,9 +57,9 @@ func (b *buffer) stats(from, to int64) (Stats, int64, int64, error) {
|
||||
|
||||
return Stats{
|
||||
Samples: samples,
|
||||
Avg: Float(sum) / Float(samples),
|
||||
Min: Float(min),
|
||||
Max: Float(max),
|
||||
Avg: util.Float(sum) / util.Float(samples),
|
||||
Min: util.Float(min),
|
||||
Max: util.Float(max),
|
||||
}, from, t, nil
|
||||
}
|
||||
|
||||
@ -68,14 +71,14 @@ func (m *MemoryStore) Stats(selector Selector, metric string, from, to int64) (*
|
||||
return nil, 0, 0, errors.New("invalid time range")
|
||||
}
|
||||
|
||||
minfo, ok := m.metrics[metric]
|
||||
minfo, ok := m.Metrics[metric]
|
||||
if !ok {
|
||||
return nil, 0, 0, errors.New("unkown metric: " + metric)
|
||||
}
|
||||
|
||||
n, samples := 0, 0
|
||||
avg, min, max := Float(0), math.MaxFloat32, -math.MaxFloat32
|
||||
err := m.root.findBuffers(selector, minfo.offset, func(b *buffer) error {
|
||||
avg, min, max := util.Float(0), math.MaxFloat32, -math.MaxFloat32
|
||||
err := m.root.findBuffers(selector, minfo.Offset, func(b *buffer) error {
|
||||
stats, cfrom, cto, err := b.stats(from, to)
|
||||
if err != nil {
|
||||
return err
|
||||
@ -102,16 +105,16 @@ func (m *MemoryStore) Stats(selector Selector, metric string, from, to int64) (*
|
||||
return nil, 0, 0, ErrNoData
|
||||
}
|
||||
|
||||
if minfo.Aggregation == AvgAggregation {
|
||||
avg /= Float(n)
|
||||
} else if n > 1 && minfo.Aggregation != SumAggregation {
|
||||
if minfo.Aggregation == config.AvgAggregation {
|
||||
avg /= util.Float(n)
|
||||
} else if n > 1 && minfo.Aggregation != config.SumAggregation {
|
||||
return nil, 0, 0, errors.New("invalid aggregation")
|
||||
}
|
||||
|
||||
return &Stats{
|
||||
Samples: samples,
|
||||
Avg: avg,
|
||||
Min: Float(min),
|
||||
Max: Float(max),
|
||||
Min: util.Float(min),
|
||||
Max: util.Float(max),
|
||||
}, from, to, nil
|
||||
}
|
@ -1,542 +0,0 @@
|
||||
package memstore
|
||||
|
||||
import (
|
||||
"errors"
|
||||
"sync"
|
||||
"unsafe"
|
||||
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/api"
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/config"
|
||||
"github.com/ClusterCockpit/cc-metric-store/internal/util"
|
||||
)
|
||||
|
||||
// Default buffer capacity.
|
||||
// `buffer.data` will only ever grow up to it's capacity and a new link
|
||||
// in the buffer chain will be created if needed so that no copying
|
||||
// of data or reallocation needs to happen on writes.
|
||||
const (
|
||||
BUFFER_CAP int = 512
|
||||
)
|
||||
|
||||
// So that we can reuse allocations
|
||||
var bufferPool sync.Pool = sync.Pool{
|
||||
New: func() interface{} {
|
||||
return &buffer{
|
||||
data: make([]util.Float, 0, BUFFER_CAP),
|
||||
}
|
||||
},
|
||||
}
|
||||
|
||||
var (
|
||||
ErrNoData error = errors.New("no data for this metric/level")
|
||||
ErrDataDoesNotAlign error = errors.New("data from lower granularities does not align")
|
||||
)
|
||||
|
||||
// Each metric on each level has it's own buffer.
|
||||
// This is where the actual values go.
|
||||
// If `cap(data)` is reached, a new buffer is created and
|
||||
// becomes the new head of a buffer list.
|
||||
type buffer struct {
|
||||
frequency int64 // Time between two "slots"
|
||||
start int64 // Timestamp of when `data[0]` was written.
|
||||
data []util.Float // The slice should never reallocacte as `cap(data)` is respected.
|
||||
prev, next *buffer // `prev` contains older data, `next` newer data.
|
||||
archived bool // If true, this buffer is already archived
|
||||
|
||||
closed bool
|
||||
/*
|
||||
statisticts struct {
|
||||
samples int
|
||||
min Float
|
||||
max Float
|
||||
avg Float
|
||||
}
|
||||
*/
|
||||
}
|
||||
|
||||
func newBuffer(ts, freq int64) *buffer {
|
||||
b := bufferPool.Get().(*buffer)
|
||||
b.frequency = freq
|
||||
b.start = ts - (freq / 2)
|
||||
b.prev = nil
|
||||
b.next = nil
|
||||
b.archived = false
|
||||
b.closed = false
|
||||
b.data = b.data[:0]
|
||||
return b
|
||||
}
|
||||
|
||||
// If a new buffer was created, the new head is returnd.
|
||||
// Otherwise, the existing buffer is returnd.
|
||||
// Normaly, only "newer" data should be written, but if the value would
|
||||
// end up in the same buffer anyways it is allowed.
|
||||
func (b *buffer) write(ts int64, value util.Float) (*buffer, error) {
|
||||
if ts < b.start {
|
||||
return nil, errors.New("cannot write value to buffer from past")
|
||||
}
|
||||
|
||||
// idx := int((ts - b.start + (b.frequency / 3)) / b.frequency)
|
||||
idx := int((ts - b.start) / b.frequency)
|
||||
if idx >= cap(b.data) {
|
||||
newbuf := newBuffer(ts, b.frequency)
|
||||
newbuf.prev = b
|
||||
b.next = newbuf
|
||||
b.close()
|
||||
b = newbuf
|
||||
idx = 0
|
||||
}
|
||||
|
||||
// Overwriting value or writing value from past
|
||||
if idx < len(b.data) {
|
||||
b.data[idx] = value
|
||||
return b, nil
|
||||
}
|
||||
|
||||
// Fill up unwritten slots with NaN
|
||||
for i := len(b.data); i < idx; i++ {
|
||||
b.data = append(b.data, util.NaN)
|
||||
}
|
||||
|
||||
b.data = append(b.data, value)
|
||||
return b, nil
|
||||
}
|
||||
|
||||
func (b *buffer) end() int64 {
|
||||
return b.firstWrite() + int64(len(b.data))*b.frequency
|
||||
}
|
||||
|
||||
func (b *buffer) firstWrite() int64 {
|
||||
return b.start + (b.frequency / 2)
|
||||
}
|
||||
|
||||
func (b *buffer) close() {}
|
||||
|
||||
/*
|
||||
func (b *buffer) close() {
|
||||
if b.closed {
|
||||
return
|
||||
}
|
||||
|
||||
b.closed = true
|
||||
n, sum, min, max := 0, 0., math.MaxFloat64, -math.MaxFloat64
|
||||
for _, x := range b.data {
|
||||
if x.IsNaN() {
|
||||
continue
|
||||
}
|
||||
|
||||
n += 1
|
||||
f := float64(x)
|
||||
sum += f
|
||||
min = math.Min(min, f)
|
||||
max = math.Max(max, f)
|
||||
}
|
||||
|
||||
b.statisticts.samples = n
|
||||
if n > 0 {
|
||||
b.statisticts.avg = Float(sum / float64(n))
|
||||
b.statisticts.min = Float(min)
|
||||
b.statisticts.max = Float(max)
|
||||
} else {
|
||||
b.statisticts.avg = NaN
|
||||
b.statisticts.min = NaN
|
||||
b.statisticts.max = NaN
|
||||
}
|
||||
}
|
||||
*/
|
||||
|
||||
// func interpolate(idx int, data []Float) Float {
|
||||
// if idx == 0 || idx+1 == len(data) {
|
||||
// return NaN
|
||||
// }
|
||||
// return (data[idx-1] + data[idx+1]) / 2.0
|
||||
// }
|
||||
|
||||
// Return all known values from `from` to `to`. Gaps of information are represented as NaN.
|
||||
// Simple linear interpolation is done between the two neighboring cells if possible.
|
||||
// If values at the start or end are missing, instead of NaN values, the second and thrid
|
||||
// return values contain the actual `from`/`to`.
|
||||
// This function goes back the buffer chain if `from` is older than the currents buffer start.
|
||||
// The loaded values are added to `data` and `data` is returned, possibly with a shorter length.
|
||||
// If `data` is not long enough to hold all values, this function will panic!
|
||||
func (b *buffer) read(from, to int64, data []util.Float) ([]util.Float, int64, int64, error) {
|
||||
if from < b.firstWrite() {
|
||||
if b.prev != nil {
|
||||
return b.prev.read(from, to, data)
|
||||
}
|
||||
from = b.firstWrite()
|
||||
}
|
||||
|
||||
var i int = 0
|
||||
var t int64 = from
|
||||
for ; t < to; t += b.frequency {
|
||||
idx := int((t - b.start) / b.frequency)
|
||||
if idx >= cap(b.data) {
|
||||
if b.next == nil {
|
||||
break
|
||||
}
|
||||
b = b.next
|
||||
idx = 0
|
||||
}
|
||||
|
||||
if idx >= len(b.data) {
|
||||
if b.next == nil || to <= b.next.start {
|
||||
break
|
||||
}
|
||||
data[i] += util.NaN
|
||||
} else if t < b.start {
|
||||
data[i] += util.NaN
|
||||
// } else if b.data[idx].IsNaN() {
|
||||
// data[i] += interpolate(idx, b.data)
|
||||
} else {
|
||||
data[i] += b.data[idx]
|
||||
}
|
||||
i++
|
||||
}
|
||||
|
||||
return data[:i], from, t, nil
|
||||
}
|
||||
|
||||
// Returns true if this buffer needs to be freed.
|
||||
func (b *buffer) free(t int64) (delme bool, n int) {
|
||||
if b.prev != nil {
|
||||
delme, m := b.prev.free(t)
|
||||
n += m
|
||||
if delme {
|
||||
b.prev.next = nil
|
||||
if cap(b.prev.data) == BUFFER_CAP {
|
||||
bufferPool.Put(b.prev)
|
||||
}
|
||||
b.prev = nil
|
||||
}
|
||||
}
|
||||
|
||||
end := b.end()
|
||||
if end < t {
|
||||
return true, n + 1
|
||||
}
|
||||
|
||||
return false, n
|
||||
}
|
||||
|
||||
// Call `callback` on every buffer that contains data in the range from `from` to `to`.
|
||||
func (b *buffer) iterFromTo(from, to int64, callback func(b *buffer) error) error {
|
||||
if b == nil {
|
||||
return nil
|
||||
}
|
||||
|
||||
if err := b.prev.iterFromTo(from, to, callback); err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
if from <= b.end() && b.start <= to {
|
||||
return callback(b)
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
|
||||
func (b *buffer) count() int64 {
|
||||
res := int64(len(b.data))
|
||||
if b.prev != nil {
|
||||
res += b.prev.count()
|
||||
}
|
||||
return res
|
||||
}
|
||||
|
||||
// Could also be called "node" as this forms a node in a tree structure.
|
||||
// Called level because "node" might be confusing here.
|
||||
// Can be both a leaf or a inner node. In this tree structue, inner nodes can
|
||||
// also hold data (in `metrics`).
|
||||
type level struct {
|
||||
lock sync.RWMutex
|
||||
metrics []*buffer // Every level can store metrics.
|
||||
children map[string]*level // Lower levels.
|
||||
}
|
||||
|
||||
// Find the correct level for the given selector, creating it if
|
||||
// it does not exist. Example selector in the context of the
|
||||
// ClusterCockpit could be: []string{ "emmy", "host123", "cpu0" }.
|
||||
// This function would probably benefit a lot from `level.children` beeing a `sync.Map`?
|
||||
func (l *level) findLevelOrCreate(selector []string, nMetrics int) *level {
|
||||
if len(selector) == 0 {
|
||||
return l
|
||||
}
|
||||
|
||||
// Allow concurrent reads:
|
||||
l.lock.RLock()
|
||||
var child *level
|
||||
var ok bool
|
||||
if l.children == nil {
|
||||
// Children map needs to be created...
|
||||
l.lock.RUnlock()
|
||||
} else {
|
||||
child, ok := l.children[selector[0]]
|
||||
l.lock.RUnlock()
|
||||
if ok {
|
||||
return child.findLevelOrCreate(selector[1:], nMetrics)
|
||||
}
|
||||
}
|
||||
|
||||
// The level does not exist, take write lock for unqiue access:
|
||||
l.lock.Lock()
|
||||
// While this thread waited for the write lock, another thread
|
||||
// could have created the child node.
|
||||
if l.children != nil {
|
||||
child, ok = l.children[selector[0]]
|
||||
if ok {
|
||||
l.lock.Unlock()
|
||||
return child.findLevelOrCreate(selector[1:], nMetrics)
|
||||
}
|
||||
}
|
||||
|
||||
child = &level{
|
||||
metrics: make([]*buffer, nMetrics),
|
||||
children: nil,
|
||||
}
|
||||
|
||||
if l.children != nil {
|
||||
l.children[selector[0]] = child
|
||||
} else {
|
||||
l.children = map[string]*level{selector[0]: child}
|
||||
}
|
||||
l.lock.Unlock()
|
||||
return child.findLevelOrCreate(selector[1:], nMetrics)
|
||||
}
|
||||
|
||||
func (l *level) free(t int64) (int, error) {
|
||||
l.lock.Lock()
|
||||
defer l.lock.Unlock()
|
||||
|
||||
n := 0
|
||||
for i, b := range l.metrics {
|
||||
if b != nil {
|
||||
delme, m := b.free(t)
|
||||
n += m
|
||||
if delme {
|
||||
if cap(b.data) == BUFFER_CAP {
|
||||
bufferPool.Put(b)
|
||||
}
|
||||
l.metrics[i] = nil
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
for _, l := range l.children {
|
||||
m, err := l.free(t)
|
||||
n += m
|
||||
if err != nil {
|
||||
return n, err
|
||||
}
|
||||
}
|
||||
|
||||
return n, nil
|
||||
}
|
||||
|
||||
func (l *level) sizeInBytes() int64 {
|
||||
l.lock.RLock()
|
||||
defer l.lock.RUnlock()
|
||||
size := int64(0)
|
||||
|
||||
for _, b := range l.metrics {
|
||||
if b != nil {
|
||||
size += b.count() * int64(unsafe.Sizeof(util.Float(0)))
|
||||
}
|
||||
}
|
||||
|
||||
for _, child := range l.children {
|
||||
size += child.sizeInBytes()
|
||||
}
|
||||
|
||||
return size
|
||||
}
|
||||
|
||||
type MemoryStore struct {
|
||||
root level // root of the tree structure
|
||||
metrics map[string]config.MetricConfig
|
||||
}
|
||||
|
||||
// Return a new, initialized instance of a MemoryStore.
|
||||
// Will panic if values in the metric configurations are invalid.
|
||||
func NewMemoryStore(metrics map[string]config.MetricConfig) *MemoryStore {
|
||||
offset := 0
|
||||
for key, config := range metrics {
|
||||
if config.Frequency == 0 {
|
||||
panic("invalid frequency")
|
||||
}
|
||||
|
||||
metrics[key] = MetricConfig{
|
||||
Frequency: config.Frequency,
|
||||
Aggregation: config.Aggregation,
|
||||
offset: offset,
|
||||
}
|
||||
offset += 1
|
||||
}
|
||||
|
||||
return &MemoryStore{
|
||||
root: level{
|
||||
metrics: make([]*buffer, len(metrics)),
|
||||
children: make(map[string]*level),
|
||||
},
|
||||
metrics: metrics,
|
||||
}
|
||||
}
|
||||
|
||||
// Write all values in `metrics` to the level specified by `selector` for time `ts`.
|
||||
// Look at `findLevelOrCreate` for how selectors work.
|
||||
func (m *MemoryStore) Write(selector []string, ts int64, metrics []api.Metric) error {
|
||||
var ok bool
|
||||
for i, metric := range metrics {
|
||||
if metric.mc.Frequency == 0 {
|
||||
metric.mc, ok = m.metrics[metric.Name]
|
||||
if !ok {
|
||||
metric.mc.Frequency = 0
|
||||
}
|
||||
metrics[i] = metric
|
||||
}
|
||||
}
|
||||
|
||||
return m.WriteToLevel(&m.root, selector, ts, metrics)
|
||||
}
|
||||
|
||||
func (m *MemoryStore) GetLevel(selector []string) *level {
|
||||
return m.root.findLevelOrCreate(selector, len(m.metrics))
|
||||
}
|
||||
|
||||
// Assumes that `minfo` in `metrics` is filled in!
|
||||
func (m *MemoryStore) WriteToLevel(l *level, selector []string, ts int64, metrics []api.Metric) error {
|
||||
l = l.findLevelOrCreate(selector, len(m.metrics))
|
||||
l.lock.Lock()
|
||||
defer l.lock.Unlock()
|
||||
|
||||
for _, metric := range metrics {
|
||||
if metric.mc.Frequency == 0 {
|
||||
continue
|
||||
}
|
||||
|
||||
b := l.metrics[metric.mc.offset]
|
||||
if b == nil {
|
||||
// First write to this metric and level
|
||||
b = newBuffer(ts, metric.mc.Frequency)
|
||||
l.metrics[metric.mc.offset] = b
|
||||
}
|
||||
|
||||
nb, err := b.write(ts, metric.Value)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
// Last write created a new buffer...
|
||||
if b != nb {
|
||||
l.metrics[metric.mc.offset] = nb
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
// Returns all values for metric `metric` from `from` to `to` for the selected level(s).
|
||||
// If the level does not hold the metric itself, the data will be aggregated recursively from the children.
|
||||
// The second and third return value are the actual from/to for the data. Those can be different from
|
||||
// the range asked for if no data was available.
|
||||
func (m *MemoryStore) Read(selector Selector, metric string, from, to int64) ([]Float, int64, int64, error) {
|
||||
if from > to {
|
||||
return nil, 0, 0, errors.New("invalid time range")
|
||||
}
|
||||
|
||||
minfo, ok := m.metrics[metric]
|
||||
if !ok {
|
||||
return nil, 0, 0, errors.New("unkown metric: " + metric)
|
||||
}
|
||||
|
||||
n, data := 0, make([]Float, (to-from)/minfo.Frequency+1)
|
||||
err := m.root.findBuffers(selector, minfo.offset, func(b *buffer) error {
|
||||
cdata, cfrom, cto, err := b.read(from, to, data)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
if n == 0 {
|
||||
from, to = cfrom, cto
|
||||
} else if from != cfrom || to != cto || len(data) != len(cdata) {
|
||||
missingfront, missingback := int((from-cfrom)/minfo.Frequency), int((to-cto)/minfo.Frequency)
|
||||
if missingfront != 0 {
|
||||
return ErrDataDoesNotAlign
|
||||
}
|
||||
|
||||
newlen := len(cdata) - missingback
|
||||
if newlen < 1 {
|
||||
return ErrDataDoesNotAlign
|
||||
}
|
||||
cdata = cdata[0:newlen]
|
||||
if len(cdata) != len(data) {
|
||||
return ErrDataDoesNotAlign
|
||||
}
|
||||
|
||||
from, to = cfrom, cto
|
||||
}
|
||||
|
||||
data = cdata
|
||||
n += 1
|
||||
return nil
|
||||
})
|
||||
|
||||
if err != nil {
|
||||
return nil, 0, 0, err
|
||||
} else if n == 0 {
|
||||
return nil, 0, 0, errors.New("metric or host not found")
|
||||
} else if n > 1 {
|
||||
if minfo.Aggregation == AvgAggregation {
|
||||
normalize := 1. / Float(n)
|
||||
for i := 0; i < len(data); i++ {
|
||||
data[i] *= normalize
|
||||
}
|
||||
} else if minfo.Aggregation != SumAggregation {
|
||||
return nil, 0, 0, errors.New("invalid aggregation")
|
||||
}
|
||||
}
|
||||
|
||||
return data, from, to, nil
|
||||
}
|
||||
|
||||
// Release all buffers for the selected level and all its children that contain only
|
||||
// values older than `t`.
|
||||
func (m *MemoryStore) Free(selector []string, t int64) (int, error) {
|
||||
return m.GetLevel(selector).free(t)
|
||||
}
|
||||
|
||||
func (m *MemoryStore) FreeAll() error {
|
||||
for k := range m.root.children {
|
||||
delete(m.root.children, k)
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
|
||||
func (m *MemoryStore) SizeInBytes() int64 {
|
||||
return m.root.sizeInBytes()
|
||||
}
|
||||
|
||||
// Given a selector, return a list of all children of the level selected.
|
||||
func (m *MemoryStore) ListChildren(selector []string) []string {
|
||||
lvl := &m.root
|
||||
for lvl != nil && len(selector) != 0 {
|
||||
lvl.lock.RLock()
|
||||
next := lvl.children[selector[0]]
|
||||
lvl.lock.RUnlock()
|
||||
lvl = next
|
||||
selector = selector[1:]
|
||||
}
|
||||
|
||||
if lvl == nil {
|
||||
return nil
|
||||
}
|
||||
|
||||
lvl.lock.RLock()
|
||||
defer lvl.lock.RUnlock()
|
||||
|
||||
children := make([]string, 0, len(lvl.children))
|
||||
for child := range lvl.children {
|
||||
children = append(children, child)
|
||||
}
|
||||
|
||||
return children
|
||||
}
|
@ -1,123 +0,0 @@
|
||||
package memstore
|
||||
|
||||
import (
|
||||
"encoding/json"
|
||||
"errors"
|
||||
)
|
||||
|
||||
type SelectorElement struct {
|
||||
Any bool
|
||||
String string
|
||||
Group []string
|
||||
}
|
||||
|
||||
func (se *SelectorElement) UnmarshalJSON(input []byte) error {
|
||||
if input[0] == '"' {
|
||||
if err := json.Unmarshal(input, &se.String); err != nil {
|
||||
return err
|
||||
}
|
||||
|
||||
if se.String == "*" {
|
||||
se.Any = true
|
||||
se.String = ""
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
|
||||
if input[0] == '[' {
|
||||
return json.Unmarshal(input, &se.Group)
|
||||
}
|
||||
|
||||
return errors.New("the Go SelectorElement type can only be a string or an array of strings")
|
||||
}
|
||||
|
||||
func (se *SelectorElement) MarshalJSON() ([]byte, error) {
|
||||
if se.Any {
|
||||
return []byte("\"*\""), nil
|
||||
}
|
||||
|
||||
if se.String != "" {
|
||||
return json.Marshal(se.String)
|
||||
}
|
||||
|
||||
if se.Group != nil {
|
||||
return json.Marshal(se.Group)
|
||||
}
|
||||
|
||||
return nil, errors.New("a Go Selector must be a non-empty string or a non-empty slice of strings")
|
||||
}
|
||||
|
||||
type Selector []SelectorElement
|
||||
|
||||
func (l *level) findLevel(selector []string) *level {
|
||||
if len(selector) == 0 {
|
||||
return l
|
||||
}
|
||||
|
||||
l.lock.RLock()
|
||||
defer l.lock.RUnlock()
|
||||
|
||||
lvl := l.children[selector[0]]
|
||||
if lvl == nil {
|
||||
return nil
|
||||
}
|
||||
|
||||
return lvl.findLevel(selector[1:])
|
||||
}
|
||||
|
||||
func (l *level) findBuffers(selector Selector, offset int, f func(b *buffer) error) error {
|
||||
l.lock.RLock()
|
||||
defer l.lock.RUnlock()
|
||||
|
||||
if len(selector) == 0 {
|
||||
b := l.metrics[offset]
|
||||
if b != nil {
|
||||
return f(b)
|
||||
}
|
||||
|
||||
for _, lvl := range l.children {
|
||||
err := lvl.findBuffers(nil, offset, f)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
sel := selector[0]
|
||||
if len(sel.String) != 0 && l.children != nil {
|
||||
lvl, ok := l.children[sel.String]
|
||||
if ok {
|
||||
err := lvl.findBuffers(selector[1:], offset, f)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
if sel.Group != nil && l.children != nil {
|
||||
for _, key := range sel.Group {
|
||||
lvl, ok := l.children[key]
|
||||
if ok {
|
||||
err := lvl.findBuffers(selector[1:], offset, f)
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
if sel.Any && l.children != nil {
|
||||
for _, lvl := range l.children {
|
||||
if err := lvl.findBuffers(selector[1:], offset, f); err != nil {
|
||||
return err
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
Loading…
Reference in New Issue
Block a user