mirror of
https://github.com/ClusterCockpit/cc-backend
synced 2024-11-10 08:57:25 +01:00
Refactor Jobs stats resolver
This commit is contained in:
parent
695e8e270a
commit
becb2bfa3a
@ -11,6 +11,7 @@ import (
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"strconv"
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"time"
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"github.com/99designs/gqlgen/graphql"
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"github.com/ClusterCockpit/cc-backend/internal/auth"
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"github.com/ClusterCockpit/cc-backend/internal/graph/generated"
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"github.com/ClusterCockpit/cc-backend/internal/graph/model"
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@ -38,7 +39,6 @@ func (r *jobResolver) Tags(ctx context.Context, obj *schema.Job) ([]*schema.Tag,
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// ConcurrentJobs is the resolver for the concurrentJobs field.
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func (r *jobResolver) ConcurrentJobs(ctx context.Context, obj *schema.Job) (*model.JobLinkResultList, error) {
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exc := int(obj.Exclusive)
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if exc != 1 {
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filter := []*model.JobFilter{}
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@ -269,7 +269,43 @@ func (r *queryResolver) Jobs(ctx context.Context, filter []*model.JobFilter, pag
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// JobsStatistics is the resolver for the jobsStatistics field.
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func (r *queryResolver) JobsStatistics(ctx context.Context, filter []*model.JobFilter, groupBy *model.Aggregate) ([]*model.JobsStatistics, error) {
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return r.Repo.JobsStatistics(ctx, filter, groupBy)
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var err error
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var stats []*model.JobsStatistics
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if requireField(ctx, "TotalJobs") {
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if requireField(ctx, "TotalCoreHours") {
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if groupBy == nil {
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stats, err = r.Repo.JobsStatsPlain(ctx, filter)
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} else {
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stats, err = r.Repo.JobsStats(ctx, filter, groupBy)
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}
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} else {
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if groupBy == nil {
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stats, err = r.Repo.JobsStatsPlainNoCoreH(ctx, filter)
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} else {
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stats, err = r.Repo.JobsStatsNoCoreH(ctx, filter, groupBy)
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}
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}
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} else {
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stats = make([]*model.JobsStatistics, 0, 1)
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}
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if err != nil {
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return nil, err
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}
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if requireField(ctx, "histDuration") || requireField(ctx, "histNumNodes") {
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if groupBy == nil {
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stats[0], err = r.Repo.AddHistograms(ctx, filter, stats[0])
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if err != nil {
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return nil, err
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}
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} else {
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return nil, errors.New("histograms only implemented without groupBy argument")
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}
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}
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return stats, nil
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}
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// JobsCount is the resolver for the jobsCount field.
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@ -367,3 +403,21 @@ type jobResolver struct{ *Resolver }
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type mutationResolver struct{ *Resolver }
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type queryResolver struct{ *Resolver }
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type subClusterResolver struct{ *Resolver }
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// !!! WARNING !!!
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// The code below was going to be deleted when updating resolvers. It has been copied here so you have
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// one last chance to move it out of harms way if you want. There are two reasons this happens:
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// - When renaming or deleting a resolver the old code will be put in here. You can safely delete
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// it when you're done.
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// - You have helper methods in this file. Move them out to keep these resolver files clean.
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func requireField(ctx context.Context, name string) bool {
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fields := graphql.CollectAllFields(ctx)
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for _, f := range fields {
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if f == name {
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return true
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}
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}
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return false
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}
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@ -10,9 +10,7 @@ import (
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"fmt"
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"time"
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"github.com/99designs/gqlgen/graphql"
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"github.com/ClusterCockpit/cc-backend/internal/auth"
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"github.com/ClusterCockpit/cc-backend/internal/config"
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"github.com/ClusterCockpit/cc-backend/internal/graph/model"
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"github.com/ClusterCockpit/cc-backend/pkg/archive"
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"github.com/ClusterCockpit/cc-backend/pkg/log"
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@ -26,14 +24,43 @@ var groupBy2column = map[model.Aggregate]string{
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model.AggregateCluster: "job.cluster",
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}
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// Helper function for the jobsStatistics GraphQL query placed here so that schema.resolvers.go is not too full.
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func (r *JobRepository) JobsStatistics(ctx context.Context,
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func (r *JobRepository) buildJobsStatsQuery(
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filter []*model.JobFilter,
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groupBy *model.Aggregate) ([]*model.JobsStatistics, error) {
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col string) sq.SelectBuilder {
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start := time.Now()
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// In case `groupBy` is nil (not used), the model.JobsStatistics used is at the key '' (empty string)
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stats := map[string]*model.JobsStatistics{}
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var query sq.SelectBuilder
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castType := r.getCastType()
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if col != "" {
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// Scan columns: id, totalJobs, totalWalltime
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query = sq.Select(col, "COUNT(job.id)",
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fmt.Sprintf("CAST(ROUND(SUM(job.duration) / 3600) as %s)", castType),
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).From("job").GroupBy(col)
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} else {
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// Scan columns: totalJobs, totalWalltime
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query = sq.Select("COUNT(job.id)",
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fmt.Sprintf("CAST(ROUND(SUM(job.duration) / 3600) as %s)", castType),
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).From("job")
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}
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for _, f := range filter {
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query = BuildWhereClause(f, query)
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}
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return query
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}
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func (r *JobRepository) getUserName(ctx context.Context, id string) string {
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user := auth.GetUser(ctx)
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name, _ := r.FindColumnValue(user, id, "user", "name", "username", false)
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if name != "" {
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return name
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} else {
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return "-"
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}
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}
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func (r *JobRepository) getCastType() string {
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var castType string
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switch r.driver {
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@ -41,42 +68,25 @@ func (r *JobRepository) JobsStatistics(ctx context.Context,
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castType = "int"
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case "mysql":
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castType = "unsigned"
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default:
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castType = ""
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}
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// `socketsPerNode` and `coresPerSocket` can differ from cluster to cluster, so we need to explicitly loop over those.
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for _, cluster := range archive.Clusters {
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for _, subcluster := range cluster.SubClusters {
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corehoursCol := fmt.Sprintf("CAST(ROUND(SUM(job.duration * job.num_nodes * %d * %d) / 3600) as %s)", subcluster.SocketsPerNode, subcluster.CoresPerSocket, castType)
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var rawQuery sq.SelectBuilder
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if groupBy == nil {
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rawQuery = sq.Select(
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"''",
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"COUNT(job.id)",
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fmt.Sprintf("CAST(ROUND(SUM(job.duration) / 3600) as %s)", castType),
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corehoursCol,
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).From("job")
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} else {
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return castType
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}
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// with groupBy and without coreHours
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func (r *JobRepository) JobsStatsNoCoreH(
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ctx context.Context,
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filter []*model.JobFilter,
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groupBy *model.Aggregate) ([]*model.JobsStatistics, error) {
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start := time.Now()
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col := groupBy2column[*groupBy]
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rawQuery = sq.Select(
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col,
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"COUNT(job.id)",
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fmt.Sprintf("CAST(ROUND(SUM(job.duration) / 3600) as %s)", castType),
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corehoursCol,
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).From("job").GroupBy(col)
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}
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rawQuery = rawQuery.
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Where("job.cluster = ?", cluster.Name).
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Where("job.subcluster = ?", subcluster.Name)
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query, qerr := SecurityCheck(ctx, rawQuery)
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if qerr != nil {
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return nil, qerr
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}
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for _, f := range filter {
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query = BuildWhereClause(f, query)
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query := r.buildJobsStatsQuery(filter, col)
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query, err := SecurityCheck(ctx, query)
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if err != nil {
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return nil, err
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}
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rows, err := query.RunWith(r.DB).Query()
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@ -85,6 +95,153 @@ func (r *JobRepository) JobsStatistics(ctx context.Context,
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return nil, err
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}
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stats := make([]*model.JobsStatistics, 0, 100)
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for rows.Next() {
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var id sql.NullString
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var jobs, walltime sql.NullInt64
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if err := rows.Scan(&id, &jobs, &walltime); err != nil {
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log.Warn("Error while scanning rows")
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return nil, err
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}
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if id.Valid {
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if col == "job.user" {
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name := r.getUserName(ctx, id.String)
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stats = append(stats,
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&model.JobsStatistics{
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ID: id.String,
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Name: &name,
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TotalJobs: int(jobs.Int64),
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TotalWalltime: int(walltime.Int64)})
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} else {
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stats = append(stats,
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&model.JobsStatistics{
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ID: id.String,
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TotalJobs: int(jobs.Int64),
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TotalWalltime: int(walltime.Int64)})
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}
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}
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}
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log.Infof("Timer JobStatistics %s", time.Since(start))
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return stats, nil
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}
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// without groupBy and without coreHours
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func (r *JobRepository) JobsStatsPlainNoCoreH(
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ctx context.Context,
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filter []*model.JobFilter) ([]*model.JobsStatistics, error) {
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start := time.Now()
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query := r.buildJobsStatsQuery(filter, "")
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query, err := SecurityCheck(ctx, query)
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if err != nil {
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return nil, err
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}
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row := query.RunWith(r.DB).QueryRow()
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stats := make([]*model.JobsStatistics, 0, 1)
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var jobs, walltime sql.NullInt64
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if err := row.Scan(&jobs, &walltime); err != nil {
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log.Warn("Error while scanning rows")
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return nil, err
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}
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if jobs.Valid {
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stats = append(stats,
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&model.JobsStatistics{
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TotalJobs: int(jobs.Int64),
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TotalWalltime: int(walltime.Int64)})
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}
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log.Infof("Timer JobStatistics %s", time.Since(start))
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return stats, nil
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}
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// without groupBy and with coreHours
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func (r *JobRepository) JobsStatsPlain(
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ctx context.Context,
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filter []*model.JobFilter) ([]*model.JobsStatistics, error) {
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start := time.Now()
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query := r.buildJobsStatsQuery(filter, "")
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query, err := SecurityCheck(ctx, query)
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if err != nil {
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return nil, err
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}
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castType := r.getCastType()
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var totalJobs, totalWalltime, totalCoreHours int64
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for _, cluster := range archive.Clusters {
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for _, subcluster := range cluster.SubClusters {
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scQuery := query.Column(fmt.Sprintf(
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"CAST(ROUND(SUM(job.duration * job.num_nodes * %d * %d) / 3600) as %s)",
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subcluster.SocketsPerNode, subcluster.CoresPerSocket, castType))
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scQuery = scQuery.Where("job.cluster = ?", cluster.Name).
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Where("job.subcluster = ?", subcluster.Name)
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row := scQuery.RunWith(r.DB).QueryRow()
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var jobs, walltime, corehours sql.NullInt64
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if err := row.Scan(&jobs, &walltime, &corehours); err != nil {
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log.Warn("Error while scanning rows")
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return nil, err
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}
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if jobs.Valid {
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totalJobs += jobs.Int64
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totalWalltime += walltime.Int64
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totalCoreHours += corehours.Int64
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}
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}
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}
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stats := make([]*model.JobsStatistics, 0, 1)
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stats = append(stats,
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&model.JobsStatistics{
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TotalJobs: int(totalJobs),
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TotalWalltime: int(totalWalltime),
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TotalCoreHours: int(totalCoreHours)})
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log.Infof("Timer JobStatistics %s", time.Since(start))
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return stats, nil
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}
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// with groupBy and with coreHours
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func (r *JobRepository) JobsStats(
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ctx context.Context,
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filter []*model.JobFilter,
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groupBy *model.Aggregate) ([]*model.JobsStatistics, error) {
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start := time.Now()
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stats := map[string]*model.JobsStatistics{}
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col := groupBy2column[*groupBy]
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query := r.buildJobsStatsQuery(filter, col)
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query, err := SecurityCheck(ctx, query)
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if err != nil {
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return nil, err
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}
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castType := r.getCastType()
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for _, cluster := range archive.Clusters {
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for _, subcluster := range cluster.SubClusters {
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scQuery := query.Column(fmt.Sprintf(
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"CAST(ROUND(SUM(job.duration * job.num_nodes * %d * %d) / 3600) as %s)",
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subcluster.SocketsPerNode, subcluster.CoresPerSocket, castType))
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scQuery = scQuery.Where("job.cluster = ?", cluster.Name).
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Where("job.subcluster = ?", subcluster.Name)
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rows, err := scQuery.RunWith(r.DB).Query()
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if err != nil {
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log.Warn("Error while querying DB for job statistics")
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return nil, err
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}
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for rows.Next() {
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var id sql.NullString
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var jobs, walltime, corehours sql.NullInt64
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@ -93,11 +250,20 @@ func (r *JobRepository) JobsStatistics(ctx context.Context,
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return nil, err
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}
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if id.Valid {
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if s, ok := stats[id.String]; ok {
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s.TotalJobs += int(jobs.Int64)
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s.TotalWalltime += int(walltime.Int64)
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s.TotalCoreHours += int(corehours.Int64)
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} else {
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if col == "job.user" {
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name := r.getUserName(ctx, id.String)
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stats[id.String] = &model.JobsStatistics{
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ID: id.String,
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Name: &name,
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TotalJobs: int(jobs.Int64),
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TotalWalltime: int(walltime.Int64),
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TotalCoreHours: int(corehours.Int64),
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}
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} else {
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stats[id.String] = &model.JobsStatistics{
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ID: id.String,
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@ -108,120 +274,50 @@ func (r *JobRepository) JobsStatistics(ctx context.Context,
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}
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}
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}
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}
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}
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if groupBy == nil {
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query := sq.Select("COUNT(job.id)").From("job").Where("job.duration < ?", config.Keys.ShortRunningJobsDuration)
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query, qerr := SecurityCheck(ctx, query)
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if qerr != nil {
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return nil, qerr
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}
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for _, f := range filter {
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query = BuildWhereClause(f, query)
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}
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if err := query.RunWith(r.DB).QueryRow().Scan(&(stats[""].ShortJobs)); err != nil {
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log.Warn("Error while scanning rows for short job stats")
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return nil, err
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}
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} else {
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col := groupBy2column[*groupBy]
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query := sq.Select(col, "COUNT(job.id)").From("job").Where("job.duration < ?", config.Keys.ShortRunningJobsDuration)
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query, qerr := SecurityCheck(ctx, query)
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if qerr != nil {
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return nil, qerr
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}
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for _, f := range filter {
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query = BuildWhereClause(f, query)
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}
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rows, err := query.RunWith(r.DB).Query()
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if err != nil {
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log.Warn("Error while querying jobs for short jobs")
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return nil, err
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}
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for rows.Next() {
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var id sql.NullString
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var shortJobs sql.NullInt64
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if err := rows.Scan(&id, &shortJobs); err != nil {
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log.Warn("Error while scanning rows for short jobs")
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return nil, err
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}
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if id.Valid {
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stats[id.String].ShortJobs = int(shortJobs.Int64)
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}
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}
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if col == "job.user" {
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for id := range stats {
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emptyDash := "-"
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user := auth.GetUser(ctx)
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name, _ := r.FindColumnValue(user, id, "user", "name", "username", false)
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if name != "" {
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stats[id].Name = &name
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} else {
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stats[id].Name = &emptyDash
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}
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}
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}
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}
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// Calculating the histogram data is expensive, so only do it if needed.
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// An explicit resolver can not be used because we need to know the filters.
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histogramsNeeded := false
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fields := graphql.CollectFieldsCtx(ctx, nil)
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for _, col := range fields {
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if col.Name == "histDuration" || col.Name == "histNumNodes" {
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histogramsNeeded = true
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}
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}
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res := make([]*model.JobsStatistics, 0, len(stats))
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for _, stat := range stats {
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res = append(res, stat)
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id, col := "", ""
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if groupBy != nil {
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id = stat.ID
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col = groupBy2column[*groupBy]
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}
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if histogramsNeeded {
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var err error
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value := fmt.Sprintf(`CAST(ROUND((CASE WHEN job.job_state = "running" THEN %d - job.start_time ELSE job.duration END) / 3600) as %s) as value`, time.Now().Unix(), castType)
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stat.HistDuration, err = r.jobsStatisticsHistogram(ctx, value, filter, id, col)
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if err != nil {
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log.Warn("Error while loading job statistics histogram: running jobs")
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return nil, err
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}
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||||
stat.HistNumNodes, err = r.jobsStatisticsHistogram(ctx, "job.num_nodes as value", filter, id, col)
|
||||
if err != nil {
|
||||
log.Warn("Error while loading job statistics histogram: num nodes")
|
||||
return nil, err
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
log.Infof("Timer JobStatistics %s", time.Since(start))
|
||||
return res, nil
|
||||
}
|
||||
|
||||
// `value` must be the column grouped by, but renamed to "value". `id` and `col` can optionally be used
|
||||
// to add a condition to the query of the kind "<col> = <id>".
|
||||
func (r *JobRepository) jobsStatisticsHistogram(ctx context.Context,
|
||||
value string, filters []*model.JobFilter, id, col string) ([]*model.HistoPoint, error) {
|
||||
func (r *JobRepository) AddHistograms(
|
||||
ctx context.Context,
|
||||
filter []*model.JobFilter,
|
||||
stat *model.JobsStatistics) (*model.JobsStatistics, error) {
|
||||
|
||||
castType := r.getCastType()
|
||||
var err error
|
||||
value := fmt.Sprintf(`CAST(ROUND((CASE WHEN job.job_state = "running" THEN %d - job.start_time ELSE job.duration END) / 3600) as %s) as value`, time.Now().Unix(), castType)
|
||||
stat.HistDuration, err = r.jobsStatisticsHistogram(ctx, value, filter)
|
||||
if err != nil {
|
||||
log.Warn("Error while loading job statistics histogram: running jobs")
|
||||
return nil, err
|
||||
}
|
||||
|
||||
stat.HistNumNodes, err = r.jobsStatisticsHistogram(ctx, "job.num_nodes as value", filter)
|
||||
if err != nil {
|
||||
log.Warn("Error while loading job statistics histogram: num nodes")
|
||||
return nil, err
|
||||
}
|
||||
|
||||
return stat, nil
|
||||
}
|
||||
|
||||
// `value` must be the column grouped by, but renamed to "value"
|
||||
func (r *JobRepository) jobsStatisticsHistogram(
|
||||
ctx context.Context,
|
||||
value string,
|
||||
filters []*model.JobFilter) ([]*model.HistoPoint, error) {
|
||||
|
||||
start := time.Now()
|
||||
query, qerr := SecurityCheck(ctx, sq.Select(value, "COUNT(job.id) AS count").From("job"))
|
||||
query, qerr := SecurityCheck(ctx,
|
||||
sq.Select(value, "COUNT(job.id) AS count").From("job"))
|
||||
|
||||
if qerr != nil {
|
||||
return nil, qerr
|
||||
@ -231,10 +327,6 @@ func (r *JobRepository) jobsStatisticsHistogram(ctx context.Context,
|
||||
query = BuildWhereClause(f, query)
|
||||
}
|
||||
|
||||
if len(id) != 0 && len(col) != 0 {
|
||||
query = query.Where(col+" = ?", id)
|
||||
}
|
||||
|
||||
rows, err := query.GroupBy("value").RunWith(r.DB).Query()
|
||||
if err != nil {
|
||||
log.Error("Error while running query")
|
||||
|
24
internal/repository/stats_test.go
Normal file
24
internal/repository/stats_test.go
Normal file
@ -0,0 +1,24 @@
|
||||
// Copyright (C) 2022 NHR@FAU, University Erlangen-Nuremberg.
|
||||
// All rights reserved.
|
||||
// Use of this source code is governed by a MIT-style
|
||||
// license that can be found in the LICENSE file.
|
||||
package repository
|
||||
|
||||
import (
|
||||
"fmt"
|
||||
"testing"
|
||||
)
|
||||
|
||||
func TestBuildJobStatsQuery(t *testing.T) {
|
||||
r := setup(t)
|
||||
q := r.buildJobsStatsQuery(nil, "USER")
|
||||
|
||||
sql, _, err := q.ToSql()
|
||||
noErr(t, err)
|
||||
|
||||
fmt.Printf("SQL: %s\n", sql)
|
||||
|
||||
if 1 != 5 {
|
||||
t.Errorf("wrong summary for diagnostic 3\ngot: %d \nwant: 1366", 5)
|
||||
}
|
||||
}
|
Loading…
Reference in New Issue
Block a user