alg benchmarking runner and processor

launch_alg_bench.py

@@ -3,8 +3,6 @@ import subprocess
 from datetime import datetime
 
 ################ HELPER FUNCTIONS ################
-
-
 def load_template(template_path: str):
     output_template = ""
     with open(template_path, "r") as handle:
@@ -16,7 +14,6 @@ def write_batch(batch_fpath: str, batch_content: str):
     with open(batch_fpath, "w") as handle:
         _ = handle.write(batch_content)
 
-
 ################### SETUP DIRS ###################
 output_dir = os.getcwd()+"/output/"
 err_dir = os.getcwd()+"/error/"
@@ -33,7 +30,7 @@ if os.path.isdir(batch_files_dir) == False:
     os.mkdir(batch_files_dir)
 
 ################ GLOBAL DEFAULTS #################
-mpi1_bin = "/home/hpc/ihpc/ihpc136h/workspace/prototyping/bin/IMB-MPI1"
+mpi1_bin = "/home/hpc/ihpc/ihpc136h/workspace/mpi-benchmark-tool/bin/IMB-MPI1"
 default_parameter = {
     "time_stamp": datetime.now().strftime("%y_%m_%d_%H-%M-%S"),
     "job_name": "",
@@ -198,9 +195,9 @@ for flag in off_cache_flags:
                                           f"{collective}_{alg.strip().replace('`','').replace(' ','_').replace('/','_')}.sh")
                 write_batch(batch_file,
                             multiple_node_template.format(**multiple_node_parameter))
-                # result = subprocess.run(["sbatch", batch_files_dir+collective+".sh"],
-                #                         capture_output=True, text=True)
-                # log += f"#{collective} {n_procs}" + "\n"
-                # log += "\tSTDOUT:" + result.stdout + "\n"
-                # log += "\tSTDERR:" + result.stderr + "\n"
+                result = subprocess.run(["sbatch", batch_file],
+                                        capture_output=True, text=True)
+                log += f"#{collective} {n_procs}" + "\n"
+                log += "\tSTDOUT:" + result.stdout + "\n"
+                log += "\tSTDERR:" + result.stderr + "\n"
 print(log)