mirror of
https://github.com/ClusterCockpit/cc-backend
synced 2024-12-26 05:19:05 +01:00
Finish refactoring
Add new packages: - metricDataDispatcher - archiver
This commit is contained in:
parent
f914a312f5
commit
e7231b0e13
@ -22,6 +22,7 @@ import (
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"github.com/ClusterCockpit/cc-backend/internal/auth"
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"github.com/ClusterCockpit/cc-backend/internal/config"
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"github.com/ClusterCockpit/cc-backend/internal/graph"
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"github.com/ClusterCockpit/cc-backend/internal/metricDataDispatcher"
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"github.com/ClusterCockpit/cc-backend/internal/metricdata"
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"github.com/ClusterCockpit/cc-backend/internal/repository"
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"github.com/ClusterCockpit/cc-backend/pkg/archive"
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@ -150,7 +151,7 @@ func setup(t *testing.T) *api.RestApi {
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t.Fatal(err)
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}
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if err := metricdata.Init(config.Keys.DisableArchive); err != nil {
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if err := metricdata.Init(); err != nil {
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t.Fatal(err)
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}
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@ -341,7 +342,7 @@ func TestRestApi(t *testing.T) {
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}
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t.Run("CheckArchive", func(t *testing.T) {
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data, err := metricdata.LoadData(stoppedJob, []string{"load_one"}, []schema.MetricScope{schema.MetricScopeNode}, context.Background())
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data, err := metricDataDispatcher.LoadData(stoppedJob, []string{"load_one"}, []schema.MetricScope{schema.MetricScopeNode}, context.Background())
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if err != nil {
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t.Fatal(err)
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}
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@ -24,7 +24,7 @@ import (
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"github.com/ClusterCockpit/cc-backend/internal/graph"
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"github.com/ClusterCockpit/cc-backend/internal/graph/model"
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"github.com/ClusterCockpit/cc-backend/internal/importer"
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"github.com/ClusterCockpit/cc-backend/internal/metricdata"
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"github.com/ClusterCockpit/cc-backend/internal/metricDataDispatcher"
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"github.com/ClusterCockpit/cc-backend/internal/repository"
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"github.com/ClusterCockpit/cc-backend/internal/util"
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"github.com/ClusterCockpit/cc-backend/pkg/archive"
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@ -515,7 +515,7 @@ func (api *RestApi) getCompleteJobById(rw http.ResponseWriter, r *http.Request)
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var data schema.JobData
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if r.URL.Query().Get("all-metrics") == "true" {
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data, err = metricdata.LoadData(job, nil, scopes, r.Context())
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data, err = metricDataDispatcher.LoadData(job, nil, scopes, r.Context())
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if err != nil {
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log.Warn("Error while loading job data")
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return
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@ -604,7 +604,7 @@ func (api *RestApi) getJobById(rw http.ResponseWriter, r *http.Request) {
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scopes = []schema.MetricScope{"node"}
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}
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data, err := metricdata.LoadData(job, metrics, scopes, r.Context())
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data, err := metricDataDispatcher.LoadData(job, metrics, scopes, r.Context())
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if err != nil {
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log.Warn("Error while loading job data")
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return
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81
internal/archiver/archiver.go
Normal file
81
internal/archiver/archiver.go
Normal file
@ -0,0 +1,81 @@
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// Copyright (C) NHR@FAU, University Erlangen-Nuremberg.
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// All rights reserved.
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// Use of this source code is governed by a MIT-style
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// license that can be found in the LICENSE file.
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package archiver
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import (
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"context"
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"math"
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"github.com/ClusterCockpit/cc-backend/internal/config"
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"github.com/ClusterCockpit/cc-backend/internal/metricDataDispatcher"
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"github.com/ClusterCockpit/cc-backend/pkg/archive"
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"github.com/ClusterCockpit/cc-backend/pkg/log"
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"github.com/ClusterCockpit/cc-backend/pkg/schema"
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)
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// Writes a running job to the job-archive
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func ArchiveJob(job *schema.Job, ctx context.Context) (*schema.JobMeta, error) {
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allMetrics := make([]string, 0)
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metricConfigs := archive.GetCluster(job.Cluster).MetricConfig
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for _, mc := range metricConfigs {
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allMetrics = append(allMetrics, mc.Name)
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}
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// TODO: Talk about this! What resolutions to store data at...
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scopes := []schema.MetricScope{schema.MetricScopeNode}
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if job.NumNodes <= 8 {
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scopes = append(scopes, schema.MetricScopeCore)
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}
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if job.NumAcc > 0 {
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scopes = append(scopes, schema.MetricScopeAccelerator)
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}
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jobData, err := metricDataDispatcher.LoadData(job, allMetrics, scopes, ctx)
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if err != nil {
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log.Error("Error wile loading job data for archiving")
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return nil, err
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}
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jobMeta := &schema.JobMeta{
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BaseJob: job.BaseJob,
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StartTime: job.StartTime.Unix(),
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Statistics: make(map[string]schema.JobStatistics),
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}
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for metric, data := range jobData {
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avg, min, max := 0.0, math.MaxFloat32, -math.MaxFloat32
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nodeData, ok := data["node"]
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if !ok {
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// TODO/FIXME: Calc average for non-node metrics as well!
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continue
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}
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for _, series := range nodeData.Series {
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avg += series.Statistics.Avg
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min = math.Min(min, series.Statistics.Min)
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max = math.Max(max, series.Statistics.Max)
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}
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jobMeta.Statistics[metric] = schema.JobStatistics{
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Unit: schema.Unit{
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Prefix: archive.GetMetricConfig(job.Cluster, metric).Unit.Prefix,
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Base: archive.GetMetricConfig(job.Cluster, metric).Unit.Base,
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},
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Avg: avg / float64(job.NumNodes),
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Min: min,
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Max: max,
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}
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}
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// If the file based archive is disabled,
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// only return the JobMeta structure as the
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// statistics in there are needed.
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if config.Keys.DisableArchive {
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return jobMeta, nil
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}
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return jobMeta, archive.GetHandle().ImportJob(jobMeta, &jobData)
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}
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@ -15,7 +15,7 @@ import (
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"github.com/ClusterCockpit/cc-backend/internal/config"
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"github.com/ClusterCockpit/cc-backend/internal/graph/generated"
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"github.com/ClusterCockpit/cc-backend/internal/graph/model"
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"github.com/ClusterCockpit/cc-backend/internal/metricdata"
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"github.com/ClusterCockpit/cc-backend/internal/metricDataDispatcher"
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"github.com/ClusterCockpit/cc-backend/internal/repository"
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"github.com/ClusterCockpit/cc-backend/pkg/archive"
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"github.com/ClusterCockpit/cc-backend/pkg/log"
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@ -231,7 +231,7 @@ func (r *queryResolver) JobMetrics(ctx context.Context, id string, metrics []str
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return nil, err
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}
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data, err := metricdata.LoadData(job, metrics, scopes, ctx)
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data, err := metricDataDispatcher.LoadData(job, metrics, scopes, ctx)
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if err != nil {
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log.Warn("Error while loading job data")
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return nil, err
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@ -383,7 +383,7 @@ func (r *queryResolver) NodeMetrics(ctx context.Context, cluster string, nodes [
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}
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}
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data, err := metricdata.LoadNodeData(cluster, metrics, nodes, scopes, from, to, ctx)
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data, err := metricDataDispatcher.LoadNodeData(cluster, metrics, nodes, scopes, from, to, ctx)
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if err != nil {
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log.Warn("Error while loading node data")
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return nil, err
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@ -440,9 +440,11 @@ func (r *Resolver) Query() generated.QueryResolver { return &queryResolver{r} }
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// SubCluster returns generated.SubClusterResolver implementation.
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func (r *Resolver) SubCluster() generated.SubClusterResolver { return &subClusterResolver{r} }
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type clusterResolver struct{ *Resolver }
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type jobResolver struct{ *Resolver }
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type metricValueResolver struct{ *Resolver }
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type mutationResolver struct{ *Resolver }
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type queryResolver struct{ *Resolver }
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type subClusterResolver struct{ *Resolver }
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type (
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clusterResolver struct{ *Resolver }
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jobResolver struct{ *Resolver }
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metricValueResolver struct{ *Resolver }
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mutationResolver struct{ *Resolver }
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queryResolver struct{ *Resolver }
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subClusterResolver struct{ *Resolver }
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)
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@ -11,7 +11,7 @@ import (
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"github.com/99designs/gqlgen/graphql"
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"github.com/ClusterCockpit/cc-backend/internal/graph/model"
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"github.com/ClusterCockpit/cc-backend/internal/metricdata"
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"github.com/ClusterCockpit/cc-backend/internal/metricDataDispatcher"
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"github.com/ClusterCockpit/cc-backend/pkg/log"
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"github.com/ClusterCockpit/cc-backend/pkg/schema"
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// "github.com/ClusterCockpit/cc-backend/pkg/archive"
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@ -24,8 +24,8 @@ func (r *queryResolver) rooflineHeatmap(
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ctx context.Context,
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filter []*model.JobFilter,
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rows int, cols int,
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minX float64, minY float64, maxX float64, maxY float64) ([][]float64, error) {
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minX float64, minY float64, maxX float64, maxY float64,
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) ([][]float64, error) {
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jobs, err := r.Repo.QueryJobs(ctx, filter, &model.PageRequest{Page: 1, ItemsPerPage: MAX_JOBS_FOR_ANALYSIS + 1}, nil)
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if err != nil {
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log.Error("Error while querying jobs for roofline")
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@ -47,7 +47,7 @@ func (r *queryResolver) rooflineHeatmap(
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continue
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}
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jobdata, err := metricdata.LoadData(job, []string{"flops_any", "mem_bw"}, []schema.MetricScope{schema.MetricScopeNode}, ctx)
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jobdata, err := metricDataDispatcher.LoadData(job, []string{"flops_any", "mem_bw"}, []schema.MetricScope{schema.MetricScopeNode}, ctx)
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if err != nil {
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log.Errorf("Error while loading roofline metrics for job %d", job.ID)
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return nil, err
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@ -120,7 +120,7 @@ func (r *queryResolver) jobsFootprints(ctx context.Context, filter []*model.JobF
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continue
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}
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if err := metricdata.LoadAverages(job, metrics, avgs, ctx); err != nil {
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if err := metricDataDispatcher.LoadAverages(job, metrics, avgs, ctx); err != nil {
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log.Error("Error while loading averages for footprint")
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return nil, err
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}
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@ -42,11 +42,10 @@ func LoadData(job *schema.Job,
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if job.State == schema.JobStateRunning ||
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job.MonitoringStatus == schema.MonitoringStatusRunningOrArchiving ||
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!config.Keys.DisableArchive {
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config.Keys.DisableArchive {
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repo, ok := metricdata.GetMetricDataRepo(job.Cluster)
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if !ok {
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repo, err := metricdata.GetMetricDataRepo(job.Cluster)
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if err != nil {
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return fmt.Errorf("METRICDATA/METRICDATA > no metric data repository configured for '%s'", job.Cluster), 0, 0
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}
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@ -117,7 +116,33 @@ func LoadData(job *schema.Job,
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ttl = 2 * time.Minute
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}
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prepareJobData(jd, scopes)
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// FIXME: Review: Is this really necessary or correct.
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// For /monitoring/job/<job> and some other places, flops_any and mem_bw need
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// to be available at the scope 'node'. If a job has a lot of nodes,
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// statisticsSeries should be available so that a min/median/max Graph can be
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// used instead of a lot of single lines.
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const maxSeriesSize int = 15
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for _, scopes := range jd {
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for _, jm := range scopes {
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if jm.StatisticsSeries != nil || len(jm.Series) <= maxSeriesSize {
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continue
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}
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jm.AddStatisticsSeries()
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}
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}
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nodeScopeRequested := false
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for _, scope := range scopes {
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if scope == schema.MetricScopeNode {
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nodeScopeRequested = true
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}
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}
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if nodeScopeRequested {
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jd.AddNodeScope("flops_any")
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jd.AddNodeScope("mem_bw")
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}
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return jd, ttl, size
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})
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@ -129,3 +154,78 @@ func LoadData(job *schema.Job,
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return data.(schema.JobData), nil
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}
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// Used for the jobsFootprint GraphQL-Query. TODO: Rename/Generalize.
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func LoadAverages(
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job *schema.Job,
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metrics []string,
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data [][]schema.Float,
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ctx context.Context,
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) error {
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if job.State != schema.JobStateRunning && !config.Keys.DisableArchive {
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return archive.LoadAveragesFromArchive(job, metrics, data) // #166 change also here?
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}
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repo, err := metricdata.GetMetricDataRepo(job.Cluster)
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if err != nil {
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return fmt.Errorf("METRICDATA/METRICDATA > no metric data repository configured for '%s'", job.Cluster)
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}
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stats, err := repo.LoadStats(job, metrics, ctx) // #166 how to handle stats for acc normalizazion?
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if err != nil {
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log.Errorf("Error while loading statistics for job %v (User %v, Project %v)", job.JobID, job.User, job.Project)
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return err
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}
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for i, m := range metrics {
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nodes, ok := stats[m]
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if !ok {
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data[i] = append(data[i], schema.NaN)
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continue
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}
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sum := 0.0
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for _, node := range nodes {
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sum += node.Avg
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}
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data[i] = append(data[i], schema.Float(sum))
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}
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return nil
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}
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// Used for the node/system view. Returns a map of nodes to a map of metrics.
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func LoadNodeData(
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cluster string,
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metrics, nodes []string,
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scopes []schema.MetricScope,
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from, to time.Time,
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ctx context.Context,
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) (map[string]map[string][]*schema.JobMetric, error) {
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repo, err := metricdata.GetMetricDataRepo(cluster)
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if err != nil {
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return nil, fmt.Errorf("METRICDATA/METRICDATA > no metric data repository configured for '%s'", cluster)
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}
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if metrics == nil {
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for _, m := range archive.GetCluster(cluster).MetricConfig {
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metrics = append(metrics, m.Name)
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}
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}
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data, err := repo.LoadNodeData(cluster, metrics, nodes, scopes, from, to, ctx)
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if err != nil {
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if len(data) != 0 {
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log.Warnf("partial error: %s", err.Error())
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} else {
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log.Error("Error while loading node data from metric repository")
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return nil, err
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}
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}
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if data == nil {
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return nil, fmt.Errorf("METRICDATA/METRICDATA > the metric data repository for '%s' does not support this query", cluster)
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}
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return data, nil
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}
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|
@ -11,7 +11,6 @@ import (
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"time"
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|
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"github.com/ClusterCockpit/cc-backend/internal/config"
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"github.com/ClusterCockpit/cc-backend/pkg/archive"
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"github.com/ClusterCockpit/cc-backend/pkg/log"
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"github.com/ClusterCockpit/cc-backend/pkg/schema"
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)
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@ -68,119 +67,13 @@ func Init() error {
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return nil
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}
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func GetMetricDataRepo(cluster string) MetricDataRepository {
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func GetMetricDataRepo(cluster string) (MetricDataRepository, error) {
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var err error
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repo, ok := metricDataRepos[cluster]
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|
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if !ok {
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return fmt.Errorf("METRICDATA/METRICDATA > no metric data repository configured for '%s'", job.Cluster), 0, 0
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err = fmt.Errorf("METRICDATA/METRICDATA > no metric data repository configured for '%s'", cluster)
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}
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return repo
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}
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// Used for the jobsFootprint GraphQL-Query. TODO: Rename/Generalize.
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func LoadAverages(
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job *schema.Job,
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metrics []string,
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data [][]schema.Float,
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ctx context.Context,
|
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) error {
|
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if job.State != schema.JobStateRunning && useArchive {
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return archive.LoadAveragesFromArchive(job, metrics, data) // #166 change also here?
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}
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|
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repo, ok := metricDataRepos[job.Cluster]
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if !ok {
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return fmt.Errorf("METRICDATA/METRICDATA > no metric data repository configured for '%s'", job.Cluster)
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}
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stats, err := repo.LoadStats(job, metrics, ctx) // #166 how to handle stats for acc normalizazion?
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if err != nil {
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log.Errorf("Error while loading statistics for job %v (User %v, Project %v)", job.JobID, job.User, job.Project)
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return err
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}
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|
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for i, m := range metrics {
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nodes, ok := stats[m]
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if !ok {
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data[i] = append(data[i], schema.NaN)
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continue
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}
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sum := 0.0
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for _, node := range nodes {
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sum += node.Avg
|
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}
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data[i] = append(data[i], schema.Float(sum))
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}
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return nil
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}
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|
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// Used for the node/system view. Returns a map of nodes to a map of metrics.
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func LoadNodeData(
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cluster string,
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metrics, nodes []string,
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scopes []schema.MetricScope,
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from, to time.Time,
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ctx context.Context,
|
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) (map[string]map[string][]*schema.JobMetric, error) {
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repo, ok := metricDataRepos[cluster]
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if !ok {
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return nil, fmt.Errorf("METRICDATA/METRICDATA > no metric data repository configured for '%s'", cluster)
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}
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|
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if metrics == nil {
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for _, m := range archive.GetCluster(cluster).MetricConfig {
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metrics = append(metrics, m.Name)
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}
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}
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data, err := repo.LoadNodeData(cluster, metrics, nodes, scopes, from, to, ctx)
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if err != nil {
|
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if len(data) != 0 {
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log.Warnf("partial error: %s", err.Error())
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} else {
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log.Error("Error while loading node data from metric repository")
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return nil, err
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}
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}
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|
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if data == nil {
|
||||
return nil, fmt.Errorf("METRICDATA/METRICDATA > the metric data repository for '%s' does not support this query", cluster)
|
||||
}
|
||||
|
||||
return data, nil
|
||||
}
|
||||
|
||||
// For /monitoring/job/<job> and some other places, flops_any and mem_bw need
|
||||
// to be available at the scope 'node'. If a job has a lot of nodes,
|
||||
// statisticsSeries should be available so that a min/median/max Graph can be
|
||||
// used instead of a lot of single lines.
|
||||
func prepareJobData(
|
||||
jobData schema.JobData,
|
||||
scopes []schema.MetricScope,
|
||||
) {
|
||||
const maxSeriesSize int = 15
|
||||
for _, scopes := range jobData {
|
||||
for _, jm := range scopes {
|
||||
if jm.StatisticsSeries != nil || len(jm.Series) <= maxSeriesSize {
|
||||
continue
|
||||
}
|
||||
|
||||
jm.AddStatisticsSeries()
|
||||
}
|
||||
}
|
||||
|
||||
nodeScopeRequested := false
|
||||
for _, scope := range scopes {
|
||||
if scope == schema.MetricScopeNode {
|
||||
nodeScopeRequested = true
|
||||
}
|
||||
}
|
||||
|
||||
if nodeScopeRequested {
|
||||
jobData.AddNodeScope("flops_any")
|
||||
jobData.AddNodeScope("mem_bw")
|
||||
}
|
||||
return repo, err
|
||||
}
|
||||
|
@ -9,7 +9,7 @@ import (
|
||||
"encoding/json"
|
||||
"time"
|
||||
|
||||
"github.com/ClusterCockpit/cc-backend/internal/metricdata"
|
||||
"github.com/ClusterCockpit/cc-backend/internal/archiver"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/archive"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/log"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/schema"
|
||||
@ -35,7 +35,7 @@ func (r *JobRepository) archivingWorker() {
|
||||
|
||||
// metricdata.ArchiveJob will fetch all the data from a MetricDataRepository and push into configured archive backend
|
||||
// TODO: Maybe use context with cancel/timeout here
|
||||
jobMeta, err := metricdata.ArchiveJob(job, context.Background())
|
||||
jobMeta, err := archiver.ArchiveJob(job, context.Background())
|
||||
if err != nil {
|
||||
log.Errorf("archiving job (dbid: %d) failed at archiving job step: %s", job.ID, err.Error())
|
||||
r.UpdateMonitoringStatus(job.ID, schema.MonitoringStatusArchivingFailed)
|
||||
|
@ -13,7 +13,7 @@ import (
|
||||
|
||||
"github.com/ClusterCockpit/cc-backend/internal/config"
|
||||
"github.com/ClusterCockpit/cc-backend/internal/graph/model"
|
||||
"github.com/ClusterCockpit/cc-backend/internal/metricdata"
|
||||
"github.com/ClusterCockpit/cc-backend/internal/metricDataDispatcher"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/archive"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/log"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/schema"
|
||||
@ -691,7 +691,7 @@ func (r *JobRepository) runningJobsMetricStatisticsHistogram(
|
||||
continue
|
||||
}
|
||||
|
||||
if err := metricdata.LoadAverages(job, metrics, avgs, ctx); err != nil {
|
||||
if err := metricDataDispatcher.LoadAverages(job, metrics, avgs, ctx); err != nil {
|
||||
log.Errorf("Error while loading averages for histogram: %s", err)
|
||||
return nil
|
||||
}
|
||||
|
@ -5,13 +5,10 @@
|
||||
package archive
|
||||
|
||||
import (
|
||||
"context"
|
||||
"encoding/json"
|
||||
"fmt"
|
||||
"math"
|
||||
"sync"
|
||||
|
||||
"github.com/ClusterCockpit/cc-backend/internal/metricdata"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/log"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/lrucache"
|
||||
"github.com/ClusterCockpit/cc-backend/pkg/schema"
|
||||
@ -105,71 +102,6 @@ func GetHandle() ArchiveBackend {
|
||||
return ar
|
||||
}
|
||||
|
||||
// Writes a running job to the job-archive
|
||||
func ArchiveJob(job *schema.Job, ctx context.Context) (*schema.JobMeta, error) {
|
||||
allMetrics := make([]string, 0)
|
||||
metricConfigs := GetCluster(job.Cluster).MetricConfig
|
||||
for _, mc := range metricConfigs {
|
||||
allMetrics = append(allMetrics, mc.Name)
|
||||
}
|
||||
|
||||
// TODO: Talk about this! What resolutions to store data at...
|
||||
scopes := []schema.MetricScope{schema.MetricScopeNode}
|
||||
if job.NumNodes <= 8 {
|
||||
scopes = append(scopes, schema.MetricScopeCore)
|
||||
}
|
||||
|
||||
if job.NumAcc > 0 {
|
||||
scopes = append(scopes, schema.MetricScopeAccelerator)
|
||||
}
|
||||
|
||||
jobData, err := metricdata.LoadData(job, allMetrics, scopes, ctx)
|
||||
if err != nil {
|
||||
log.Error("Error wile loading job data for archiving")
|
||||
return nil, err
|
||||
}
|
||||
|
||||
jobMeta := &schema.JobMeta{
|
||||
BaseJob: job.BaseJob,
|
||||
StartTime: job.StartTime.Unix(),
|
||||
Statistics: make(map[string]schema.JobStatistics),
|
||||
}
|
||||
|
||||
for metric, data := range jobData {
|
||||
avg, min, max := 0.0, math.MaxFloat32, -math.MaxFloat32
|
||||
nodeData, ok := data["node"]
|
||||
if !ok {
|
||||
// TODO/FIXME: Calc average for non-node metrics as well!
|
||||
continue
|
||||
}
|
||||
|
||||
for _, series := range nodeData.Series {
|
||||
avg += series.Statistics.Avg
|
||||
min = math.Min(min, series.Statistics.Min)
|
||||
max = math.Max(max, series.Statistics.Max)
|
||||
}
|
||||
|
||||
jobMeta.Statistics[metric] = schema.JobStatistics{
|
||||
Unit: schema.Unit{
|
||||
Prefix: GetMetricConfig(job.Cluster, metric).Unit.Prefix,
|
||||
Base: GetMetricConfig(job.Cluster, metric).Unit.Base,
|
||||
},
|
||||
Avg: avg / float64(job.NumNodes),
|
||||
Min: min,
|
||||
Max: max,
|
||||
}
|
||||
}
|
||||
|
||||
// If the file based archive is disabled,
|
||||
// only return the JobMeta structure as the
|
||||
// statistics in there are needed.
|
||||
if !useArchive {
|
||||
return jobMeta, nil
|
||||
}
|
||||
|
||||
return jobMeta, archive.GetHandle().ImportJob(jobMeta, &jobData)
|
||||
}
|
||||
|
||||
// Helper to metricdata.LoadAverages().
|
||||
func LoadAveragesFromArchive(
|
||||
job *schema.Job,
|
||||
|
Loading…
Reference in New Issue
Block a user