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Update scripts

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This commit is contained in:
Jan Eitzinger 2019-12-10 09:49:58 +01:00
parent e27a3fda79
commit 90ae832c2e
2 changed files with 73 additions and 51 deletions
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71
jobTag.pl
View File

@ -41,13 +41,20 @@ my $dbh = DBI->connect(
"DBI:SQLite:dbname=$database", "", "", \%attr)
or die "Could not connect to database: $DBI::errstr";
my $sth_query_job = $dbh->prepare(qq{
my $sth_select_tagged_jobs = $dbh->prepare(qq{
SELECT j.*
FROM jobtag jt, job j, tag t
WHERE jt.tag_id=t.tag_id
AND t.name=?
AND j.id=jt.job_id
GROUP BY j.id
FROM job j
JOIN jobtag jt ON j.id = jt.job_id
JOIN tag t ON jt.tag_id = t.id
WHERE t.name = ?
});
my $sth_select_job_tags = $dbh->prepare(qq{
SELECT t.*
FROM tag t
JOIN jobtag jt ON t.id = jt.tag_id
JOIN job j ON jt.job_id = j.id
WHERE j.job_id = ?
});
my $sth_select_job = $dbh->prepare(qq{
@ -72,17 +79,63 @@ my $sth_job_add_tag = $dbh->prepare(qq{
VALUES(?,?)
});
my $sth_job_has_tag = $dbh->prepare(qq{
SELECT id FROM job
WHERE job_id=? AND tag_id=?
});
my $CMD = $ARGV[0];
my $JOB_ID = $ARGV[1];
my $TAG_NAME = $ARGV[2];
my ($jid, $tid);
# check if job exists
my @row = $dbh->selectrow_array($sth_select_job, undef, $JOB_ID);
if ( @row ) {
$jid = $row[0];
} else {
die "Job does not exist: $JOB_ID!\n";
}
# check if tag already exists
@row = $dbh->selectrow_array($sth_select_tag, undef, $TAG_NAME);
if ( @row ) {
$tid = $row[0];
} else {
print "Insert new tag: $TAG_NAME!\n";
$sth_insert_tag->execute('pathologic', $TAG_NAME);
}
if ( $CMD eq 'ADD' ) {
# body...
@row = $dbh->selectrow_array($sth_job_has_tag, undef, $jid, $tid);
if ( @row ) {
die "Job already tagged!\n";
} else {
print "Adding tag $TAG_NAME to job $JOB_ID!\n";
$sth_job_add_tag($jid, $tid);
}
}
elsif ( $CMD eq 'RM' ) {
# elsif...
}
elsif ( $CMD eq 'LS' ) {
elsif ( $CMD eq 'LST' ) {
$sth_select_job_tags->execute;
my ($id, $type, $name);
while(($id,$type,$name) = $sth->fetchrow()){
print("$id, $type, $name\n");
}
$sth_select_job_tags->finish();
}
elsif ( $CMD eq 'LSJ' ) {
# elsif...
}
else {
# else...
die "Unknown command: $CMD!\n";
}
$dbh->disconnect();

53
tagController.pl
View File

@ -31,42 +31,9 @@ use utf8;
use File::Slurp;
use Data::Dumper;
use JSON::MaybeXS qw(encode_json decode_json);
use DBI;
my $database = $ARGV[0];
my $basedir = $ARGV[1];
my %attr = (
PrintError => 1,
RaiseError => 1
);
my $dbh = DBI->connect(
"DBI:SQLite:dbname=$database", "", "", \%attr)
or die "Could not connect to database: $DBI::errstr";
my $sth_select_job = $dbh->prepare(qq{
SELECT id, user_id, job_id, cluster_id,
start_time, stop_time, duration, num_nodes,
has_profile
FROM job
WHERE job_id=?
});
my $sth_update_job = $dbh->prepare(qq{
UPDATE job
SET has_profile = ?,
mem_used_max = ?,
flops_any_avg = ?,
mem_bw_avg = ?
WHERE id=?;
});
my $sth_select_tag = $dbh->prepare(qq{
SELECT id
FROM tag
WHERE tag_name=?
});
my $basedir = $ARGV[0];
my $basedir = './data';
my ($TS, $TE);
@ -81,16 +48,19 @@ $TS = time();
while ( <$fh> ) {
my $line = $_;
my ($jobID, $path1, $path2) = split ' ', $line;
my ($jobID, $system) = split '.', $line;
$counter++;
my $json = read_file($jobDirectory.'/data.json');
my $data = decode_json $json;
$json = read_file($jobDirectory.'/meta.json');
# my $json = read_file($jobDirectory.'/data.json');
# my $data = decode_json $json;
my $json = read_file($jobDirectory.'/meta.json');
my $meta = decode_json $json;
my @flopsAny = $data->{flops_any}->{series};
my @memBw = $data->{mem_bw}->{series};
my $footprint = $meta->{statistics};
if ( $footprint->{flops_any}->{max} < 2.0 and $footprint->{mem_bw}->{max} < 2.0 ){
print $fhn $jobID;
}
if ( $counter == 20 ) {
$TE = time();
@ -100,6 +70,5 @@ while ( <$fh> ) {
$TS = $TE;
}
}
$dbh->disconnect;
close $fh;
close $fhn;