mirror of
https://github.com/ClusterCockpit/cc-backend
synced 2024-11-10 08:57:25 +01:00
Introduce Retention and compression
This commit is contained in:
parent
72f178a088
commit
538427d59b
@ -7,6 +7,7 @@ package main
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import (
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"context"
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"crypto/tls"
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"encoding/json"
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"errors"
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"flag"
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"fmt"
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@ -36,7 +37,9 @@ import (
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"github.com/ClusterCockpit/cc-backend/internal/runtimeEnv"
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"github.com/ClusterCockpit/cc-backend/pkg/archive"
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"github.com/ClusterCockpit/cc-backend/pkg/log"
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"github.com/ClusterCockpit/cc-backend/pkg/schema"
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"github.com/ClusterCockpit/cc-backend/web"
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"github.com/go-co-op/gocron"
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"github.com/google/gops/agent"
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"github.com/gorilla/handlers"
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"github.com/gorilla/mux"
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@ -416,18 +419,52 @@ func main() {
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api.JobRepository.WaitForArchiving()
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}()
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s := gocron.NewScheduler(time.Local)
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if config.Keys.StopJobsExceedingWalltime > 0 {
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go func() {
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for range time.Tick(30 * time.Minute) {
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s.Every(1).Day().At("3:00").Do(func() {
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err := jobRepo.StopJobsExceedingWalltimeBy(config.Keys.StopJobsExceedingWalltime)
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if err != nil {
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log.Warnf("Error while looking for jobs exceeding their walltime: %s", err.Error())
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}
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runtime.GC()
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})
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}
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}()
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var cfg struct {
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Compression int `json:"compression"`
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Retention schema.Retention `json:"retention"`
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}
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if err := json.Unmarshal(config.Keys.Archive, &cfg); err != nil {
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log.Warn("Error while unmarshaling raw config json")
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}
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switch cfg.Retention.Policy {
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case "delete":
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s.Every(1).Day().At("4:00").Do(func() {
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jobs, err := jobRepo.FindJobsOlderThan(cfg.Retention.Age)
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if err != nil {
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log.Warnf("Error while looking for retention jobs: %s", err.Error())
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}
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archive.GetHandle().CleanUp(jobs)
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})
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case "move":
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log.Warn("Retention policy move not implemented")
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}
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if cfg.Compression > 0 {
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s.Every(1).Day().At("5:00").Do(func() {
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jobs, err := jobRepo.FindJobsOlderThan(cfg.Compression)
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if err != nil {
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log.Warnf("Error while looking for retention jobs: %s", err.Error())
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}
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archive.GetHandle().Compress(jobs)
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})
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}
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s.StartAsync()
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if os.Getenv("GOGC") == "" {
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debug.SetGCPercent(25)
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}
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5
go.mod
5
go.mod
@ -40,6 +40,7 @@ require (
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github.com/felixge/httpsnoop v1.0.3 // indirect
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github.com/ghodss/yaml v1.0.0 // indirect
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github.com/go-asn1-ber/asn1-ber v1.5.4 // indirect
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github.com/go-co-op/gocron v1.25.0 // indirect
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github.com/go-openapi/jsonpointer v0.19.6 // indirect
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github.com/go-openapi/jsonreference v0.20.2 // indirect
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github.com/go-openapi/spec v0.20.8 // indirect
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@ -55,6 +56,7 @@ require (
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github.com/josharian/intern v1.0.0 // indirect
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github.com/jpillora/backoff v1.0.0 // indirect
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github.com/json-iterator/go v1.1.12 // indirect
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github.com/kr/pretty v0.3.0 // indirect
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github.com/lann/builder v0.0.0-20180802200727-47ae307949d0 // indirect
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github.com/lann/ps v0.0.0-20150810152359-62de8c46ede0 // indirect
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github.com/mailru/easyjson v0.7.7 // indirect
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@ -67,7 +69,10 @@ require (
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github.com/pkg/errors v0.9.1 // indirect
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github.com/prometheus/client_model v0.3.0 // indirect
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github.com/prometheus/procfs v0.9.0 // indirect
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github.com/robfig/cron/v3 v3.0.1 // indirect
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github.com/rogpeppe/go-internal v1.8.1 // indirect
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github.com/russross/blackfriday/v2 v2.1.0 // indirect
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github.com/stretchr/testify v1.8.2 // indirect
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github.com/swaggo/files v1.0.0 // indirect
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github.com/urfave/cli/v2 v2.24.4 // indirect
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github.com/xrash/smetrics v0.0.0-20201216005158-039620a65673 // indirect
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16
go.sum
16
go.sum
@ -81,8 +81,6 @@ github.com/BurntSushi/toml v0.3.1/go.mod h1:xHWCNGjB5oqiDr8zfno3MHue2Ht5sIBksp03
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github.com/BurntSushi/toml v1.1.0/go.mod h1:CxXYINrC8qIiEnFrOxCa7Jy5BFHlXnUU2pbicEuybxQ=
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github.com/BurntSushi/xgb v0.0.0-20160522181843-27f122750802/go.mod h1:IVnqGOEym/WlBOVXweHU+Q+/VP0lqqI8lqeDx9IjBqo=
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github.com/ClickHouse/clickhouse-go v1.4.3/go.mod h1:EaI/sW7Azgz9UATzd5ZdZHRUhHgv5+JMS9NSr2smCJI=
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github.com/ClusterCockpit/cc-units v0.3.0 h1:JEKgEyvN4GABheKIReW2siDXgpYf2zf4STXV2ip418Y=
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github.com/ClusterCockpit/cc-units v0.3.0/go.mod h1:3S3PAhAayS3pbgcT4q9Vn9VJw22Op51X0YimtG77zBw=
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github.com/ClusterCockpit/cc-units v0.4.0 h1:zP5DOu99GmErW0tCDf0gcLrlWt42RQ9dpoONEOh4cI0=
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github.com/ClusterCockpit/cc-units v0.4.0/go.mod h1:3S3PAhAayS3pbgcT4q9Vn9VJw22Op51X0YimtG77zBw=
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github.com/KyleBanks/depth v1.2.1 h1:5h8fQADFrWtarTdtDudMmGsC7GPbOAu6RVB3ffsVFHc=
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@ -448,6 +446,8 @@ github.com/ghodss/yaml v1.0.0 h1:wQHKEahhL6wmXdzwWG11gIVCkOv05bNOh+Rxn0yngAk=
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github.com/ghodss/yaml v1.0.0/go.mod h1:4dBDuWmgqj2HViK6kFavaiC9ZROes6MMH2rRYeMEF04=
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github.com/go-asn1-ber/asn1-ber v1.5.4 h1:vXT6d/FNDiELJnLb6hGNa309LMsrCoYFvpwHDF0+Y1A=
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github.com/go-asn1-ber/asn1-ber v1.5.4/go.mod h1:hEBeB/ic+5LoWskz+yKT7vGhhPYkProFKoKdwZRWMe0=
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github.com/go-co-op/gocron v1.25.0 h1:pzAdtily1JVIf6lGby6K0JKzhishgLOllQgNxoYbR+8=
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github.com/go-co-op/gocron v1.25.0/go.mod h1:JHrQDY4iE1HZPkgTyoccY4xtDgLbrUwL+xODIbEQdnc=
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github.com/go-fonts/dejavu v0.1.0/go.mod h1:4Wt4I4OU2Nq9asgDCteaAaWZOV24E+0/Pwo0gppep4g=
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github.com/go-fonts/latin-modern v0.2.0/go.mod h1:rQVLdDMK+mK1xscDwsqM5J8U2jrRa3T0ecnM9pNujks=
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github.com/go-fonts/liberation v0.1.1/go.mod h1:K6qoJYypsmfVjWg8KOVDQhLc8UDgIK2HYqyqAO9z7GY=
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@ -826,8 +826,9 @@ github.com/kr/fs v0.1.0/go.mod h1:FFnZGqtBN9Gxj7eW1uZ42v5BccTP0vu6NEaFoC2HwRg=
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github.com/kr/logfmt v0.0.0-20140226030751-b84e30acd515/go.mod h1:+0opPa2QZZtGFBFZlji/RkVcI2GknAs/DXo4wKdlNEc=
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github.com/kr/pretty v0.1.0/go.mod h1:dAy3ld7l9f0ibDNOQOHHMYYIIbhfbHSm3C4ZsoJORNo=
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github.com/kr/pretty v0.2.0/go.mod h1:ipq/a2n7PKx3OHsz4KJII5eveXtPO4qwEXGdVfWzfnI=
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github.com/kr/pretty v0.2.1 h1:Fmg33tUaq4/8ym9TJN1x7sLJnHVwhP33CNkpYV/7rwI=
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github.com/kr/pretty v0.2.1/go.mod h1:ipq/a2n7PKx3OHsz4KJII5eveXtPO4qwEXGdVfWzfnI=
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github.com/kr/pretty v0.3.0 h1:WgNl7dwNpEZ6jJ9k1snq4pZsg7DOEN8hP9Xw0Tsjwk0=
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github.com/kr/pretty v0.3.0/go.mod h1:640gp4NfQd8pI5XOwp5fnNeVWj67G7CFk/SaSQn7NBk=
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github.com/kr/pty v1.1.1/go.mod h1:pFQYn66WHrOpPYNljwOMqo10TkYh1fy3cYio2l3bCsQ=
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github.com/kr/pty v1.1.5/go.mod h1:9r2w37qlBe7rQ6e1fg1S/9xpWHSnaqNdHD3WcMdbPDA=
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github.com/kr/pty v1.1.8/go.mod h1:O1sed60cT9XZ5uDucP5qwvh+TE3NnUj51EiZO/lmSfw=
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@ -1009,6 +1010,7 @@ github.com/pierrec/lz4 v2.0.5+incompatible/go.mod h1:pdkljMzZIN41W+lC3N2tnIh5sFi
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github.com/pierrec/lz4/v4 v4.1.8/go.mod h1:gZWDp/Ze/IJXGXf23ltt2EXimqmTUXEy0GFuRQyBid4=
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github.com/pkg/browser v0.0.0-20210706143420-7d21f8c997e2/go.mod h1:HKlIX3XHQyzLZPlr7++PzdhaXEj94dEiJgZDTsxEqUI=
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github.com/pkg/browser v0.0.0-20210911075715-681adbf594b8/go.mod h1:HKlIX3XHQyzLZPlr7++PzdhaXEj94dEiJgZDTsxEqUI=
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github.com/pkg/diff v0.0.0-20210226163009-20ebb0f2a09e/go.mod h1:pJLUxLENpZxwdsKMEsNbx1VGcRFpLqf3715MtcvvzbA=
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github.com/pkg/errors v0.8.0/go.mod h1:bwawxfHBFNV+L2hUp1rHADufV3IMtnDRdf1r5NINEl0=
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github.com/pkg/errors v0.8.1-0.20171018195549-f15c970de5b7/go.mod h1:bwawxfHBFNV+L2hUp1rHADufV3IMtnDRdf1r5NINEl0=
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github.com/pkg/errors v0.8.1/go.mod h1:bwawxfHBFNV+L2hUp1rHADufV3IMtnDRdf1r5NINEl0=
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@ -1064,11 +1066,16 @@ github.com/qustavo/sqlhooks/v2 v2.1.0 h1:54yBemHnGHp/7xgT+pxwmIlMSDNYKx5JW5dfRAi
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github.com/qustavo/sqlhooks/v2 v2.1.0/go.mod h1:aMREyKo7fOKTwiLuWPsaHRXEmtqG4yREztO0idF83AU=
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github.com/remyoudompheng/bigfft v0.0.0-20190728182440-6a916e37a237/go.mod h1:qqbHyh8v60DhA7CoWK5oRCqLrMHRGoxYCSS9EjAz6Eo=
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github.com/remyoudompheng/bigfft v0.0.0-20200410134404-eec4a21b6bb0/go.mod h1:qqbHyh8v60DhA7CoWK5oRCqLrMHRGoxYCSS9EjAz6Eo=
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github.com/robfig/cron/v3 v3.0.1 h1:WdRxkvbJztn8LMz/QEvLN5sBU+xKpSqwwUO1Pjr4qDs=
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github.com/robfig/cron/v3 v3.0.1/go.mod h1:eQICP3HwyT7UooqI/z+Ov+PtYAWygg1TEWWzGIFLtro=
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github.com/rogpeppe/fastuuid v0.0.0-20150106093220-6724a57986af/go.mod h1:XWv6SoW27p1b0cqNHllgS5HIMJraePCO15w5zCzIWYg=
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github.com/rogpeppe/fastuuid v1.2.0/go.mod h1:jVj6XXZzXRy/MSR5jhDC/2q6DgLz+nrA6LYCDYWNEvQ=
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github.com/rogpeppe/go-internal v1.1.0/go.mod h1:M8bDsm7K2OlrFYOpmOWEs/qY81heoFRclV5y23lUDJ4=
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github.com/rogpeppe/go-internal v1.2.2/go.mod h1:M8bDsm7K2OlrFYOpmOWEs/qY81heoFRclV5y23lUDJ4=
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github.com/rogpeppe/go-internal v1.3.0/go.mod h1:M8bDsm7K2OlrFYOpmOWEs/qY81heoFRclV5y23lUDJ4=
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github.com/rogpeppe/go-internal v1.6.1/go.mod h1:xXDCJY+GAPziupqXw64V24skbSoqbTEfhy4qGm1nDQc=
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github.com/rogpeppe/go-internal v1.8.1 h1:geMPLpDpQOgVyCg5z5GoRwLHepNdb71NXb67XFkP+Eg=
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github.com/rogpeppe/go-internal v1.8.1/go.mod h1:JeRgkft04UBgHMgCIwADu4Pn6Mtm5d4nPKWu0nJ5d+o=
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github.com/rs/xid v1.2.1/go.mod h1:+uKXf+4Djp6Md1KODXJxgGQPKngRmWyn10oCKFzNHOQ=
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github.com/rs/zerolog v1.13.0/go.mod h1:YbFCdg8HfsridGWAh22vktObvhZbQsZXe4/zB0OKkWU=
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github.com/rs/zerolog v1.15.0/go.mod h1:xYTKnLHcpfU2225ny5qZjxnj9NvkumZYjJHlAThCjNc=
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@ -1146,8 +1153,9 @@ github.com/stretchr/testify v1.7.0/go.mod h1:6Fq8oRcR53rry900zMqJjRRixrwX3KX962/
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github.com/stretchr/testify v1.7.1/go.mod h1:6Fq8oRcR53rry900zMqJjRRixrwX3KX962/h/Wwjteg=
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github.com/stretchr/testify v1.7.2/go.mod h1:R6va5+xMeoiuVRoj+gSkQ7d3FALtqAAGI1FQKckRals=
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github.com/stretchr/testify v1.8.0/go.mod h1:yNjHg4UonilssWZ8iaSj1OCr/vHnekPRkoO+kdMU+MU=
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github.com/stretchr/testify v1.8.1 h1:w7B6lhMri9wdJUVmEZPGGhZzrYTPvgJArz7wNPgYKsk=
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github.com/stretchr/testify v1.8.1/go.mod h1:w2LPCIKwWwSfY2zedu0+kehJoqGctiVI29o6fzry7u4=
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github.com/stretchr/testify v1.8.2 h1:+h33VjcLVPDHtOdpUCuF+7gSuG3yGIftsP1YvFihtJ8=
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github.com/stretchr/testify v1.8.2/go.mod h1:w2LPCIKwWwSfY2zedu0+kehJoqGctiVI29o6fzry7u4=
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github.com/subosito/gotenv v1.2.0/go.mod h1:N0PQaV/YGNqwC0u51sEeR/aUtSLEXKX9iv69rRypqCw=
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github.com/swaggo/files v1.0.0 h1:1gGXVIeUFCS/dta17rnP0iOpr6CXFwKD7EO5ID233e4=
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github.com/swaggo/files v1.0.0/go.mod h1:N59U6URJLyU1PQgFqPM7wXLMhJx7QAolnvfQkqO13kc=
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@ -707,6 +707,38 @@ func (r *JobRepository) StopJobsExceedingWalltimeBy(seconds int) error {
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return nil
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}
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func (r *JobRepository) FindJobsOlderThan(days int) ([]*schema.Job, error) {
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query := sq.Select(jobColumns...).From("job").Where(fmt.Sprintf("job.start_time < %d",
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time.Now().Unix()-int64(days*24*3600)))
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sql, args, err := query.ToSql()
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if err != nil {
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log.Warn("Error while converting query to sql")
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return nil, err
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}
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log.Debugf("SQL query: `%s`, args: %#v", sql, args)
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rows, err := query.RunWith(r.stmtCache).Query()
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if err != nil {
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log.Error("Error while running query")
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return nil, err
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}
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jobs := make([]*schema.Job, 0, 50)
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for rows.Next() {
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job, err := scanJob(rows)
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if err != nil {
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rows.Close()
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log.Warn("Error while scanning rows")
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return nil, err
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}
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jobs = append(jobs, job)
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}
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return jobs, nil
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}
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// GraphQL validation should make sure that no unkown values can be specified.
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var groupBy2column = map[model.Aggregate]string{
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model.AggregateUser: "job.user",
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@ -30,9 +30,9 @@ type ArchiveBackend interface {
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GetClusters() []string
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CleanUp() error
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CleanUp(jobs []*schema.Job)
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// Compress() error
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Compress(jobs []*schema.Job)
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Iter(loadMetricData bool) <-chan JobContainer
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}
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@ -49,16 +49,8 @@ var useArchive bool
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func Init(rawConfig json.RawMessage, disableArchive bool) error {
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useArchive = !disableArchive
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type retention struct {
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Age int `json:"age"`
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Policy string `json:"policy"`
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Location string `json:"location"`
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}
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var cfg struct {
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Kind string `json:"kind"`
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Compression int `json:"compression"`
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Retention retention `json:"retention"`
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}
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if err := json.Unmarshal(rawConfig, &cfg); err != nil {
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@ -82,10 +74,6 @@ func Init(rawConfig json.RawMessage, disableArchive bool) error {
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}
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log.Infof("Load archive version %d", version)
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switch cfg. {
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case condition:
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}
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return initClusterConfig()
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}
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@ -11,6 +11,7 @@ import (
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"encoding/json"
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"errors"
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"fmt"
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"io"
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"os"
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"path"
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"path/filepath"
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@ -38,17 +39,26 @@ func checkFileExists(filePath string) bool {
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return !errors.Is(err, os.ErrNotExist)
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}
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func getDirectory(
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job *schema.Job,
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rootPath string,
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) string {
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lvl1, lvl2 := fmt.Sprintf("%d", job.JobID/1000), fmt.Sprintf("%03d", job.JobID%1000)
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|
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return filepath.Join(
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rootPath,
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job.Cluster,
|
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lvl1, lvl2,
|
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strconv.FormatInt(job.StartTime.Unix(), 10))
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}
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func getPath(
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job *schema.Job,
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rootPath string,
|
||||
file string) string {
|
||||
|
||||
lvl1, lvl2 := fmt.Sprintf("%d", job.JobID/1000), fmt.Sprintf("%03d", job.JobID%1000)
|
||||
return filepath.Join(
|
||||
rootPath,
|
||||
job.Cluster,
|
||||
lvl1, lvl2,
|
||||
strconv.FormatInt(job.StartTime.Unix(), 10), file)
|
||||
getDirectory(job, rootPath), file)
|
||||
}
|
||||
|
||||
func loadJobMeta(filename string) (*schema.JobMeta, error) {
|
||||
@ -147,12 +157,51 @@ func (fsa *FsArchive) Init(rawConfig json.RawMessage) (uint64, error) {
|
||||
return version, nil
|
||||
}
|
||||
|
||||
func (fsa *FsArchive) CleanUp() error {
|
||||
func (fsa *FsArchive) CleanUp(jobs []*schema.Job) {
|
||||
for _, job := range jobs {
|
||||
dir := getDirectory(job, fsa.path)
|
||||
if err := os.RemoveAll(dir); err != nil {
|
||||
log.Errorf("JobArchive Cleanup() error: %v", err)
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
func (fsa *FsArchive) Compress(jobs []*schema.Job) {
|
||||
for _, job := range jobs {
|
||||
fileIn := getPath(job, fsa.path, "data.json")
|
||||
if !checkFileExists(fileIn) {
|
||||
|
||||
originalFile, err := os.Open(fileIn)
|
||||
if err != nil {
|
||||
log.Errorf("JobArchive Compress() error: %v", err)
|
||||
}
|
||||
defer originalFile.Close()
|
||||
|
||||
fileOut := getPath(job, fsa.path, "data.json.gz")
|
||||
gzippedFile, err := os.Create(fileOut)
|
||||
|
||||
if err != nil {
|
||||
log.Errorf("JobArchive Compress() error: %v", err)
|
||||
}
|
||||
defer gzippedFile.Close()
|
||||
|
||||
gzipWriter := gzip.NewWriter(gzippedFile)
|
||||
defer gzipWriter.Close()
|
||||
|
||||
_, err = io.Copy(gzipWriter, originalFile)
|
||||
if err != nil {
|
||||
log.Errorf("JobArchive Compress() error: %v", err)
|
||||
}
|
||||
gzipWriter.Flush()
|
||||
if err := os.Remove(fileIn); err != nil {
|
||||
log.Errorf("JobArchive Compress() error: %v", err)
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
func (fsa *FsArchive) LoadJobData(job *schema.Job) (schema.JobData, error) {
|
||||
var isCompressed bool = true
|
||||
var isCompressed bool
|
||||
filename := getPath(job, fsa.path, "data.json.gz")
|
||||
if !checkFileExists(filename) {
|
||||
filename = getPath(job, fsa.path, "data.json")
|
||||
@ -227,7 +276,7 @@ func (fsa *FsArchive) Iter(loadMetricData bool) <-chan JobContainer {
|
||||
}
|
||||
|
||||
if loadMetricData {
|
||||
var isCompressed bool = true
|
||||
var isCompressed bool
|
||||
filename := filepath.Join(dirpath, startTimeDir.Name(), "data.json.gz")
|
||||
|
||||
if !checkFileExists(filename) {
|
||||
|
||||
@ -57,6 +57,12 @@ type ClusterConfig struct {
|
||||
MetricDataRepository json.RawMessage `json:"metricDataRepository"`
|
||||
}
|
||||
|
||||
type Retention struct {
|
||||
Age int `json:"age"`
|
||||
Policy string `json:"policy"`
|
||||
Location string `json:"location"`
|
||||
}
|
||||
|
||||
// Format of the configuration (file). See below for the defaults.
|
||||
type ProgramConfig struct {
|
||||
// Address where the http (or https) server will listen on (for example: 'localhost:80').
|
||||
|
||||
Loading…
Reference in New Issue
Block a user