Name,Keyword AMS,ams_pipeline QuantumESPRESSO,pw.x; pp.x; cp.x; neb.x; load qe GOLD,GOLDHPC_DIR; GOLDIMAGE; GOLD_PATH; GOLD_PATH; CCDC_LICENSING_CONFIGURATION; GOLD_LOG_LEVEL MATLAB,matlab; -nodisplay; -nosplash VASP,vasp_std; $VASP; vasp.out; vasp.err; .vasp; vasp_gam; vasp_ncl; load vasp6 CP2K,cp2k.psmp; load cp2k; cp2k.popt Chroma,chroma ORCA,${ORCABASE}; load orca; .gbw BigDFT,bigdft LAMMPS,lmp -in; lmp_oneapi; --error=lammps; load lammps; lammps_ AlphaFold3,alphafold3; af3; run_alphafold.py; af_input STAR-CCM+,CCMARGS; add star-ccm+; starccm+ Nek5000,nek5000; Nek5000 TurTLE,TurTLE; python refine.py; NSVE AMBER,load amber; pmemd.; add amber; complex=AB; MMPBSA.py.MPI; sander; tleap ALF,ALF.out; max_sac; ALF_MPI Caracal,calc_rate.x; caracal Capriccio,Capriccio Arepo,Arepo WRF,WRFIO_; WRF_; wrf.input; activate wrf; wrf.exe; log.wrf Whisper,whisper deal.II,dealii AIMS,aims. FLAME,FLAME; /src/flame; /app/flame PyRAI2MD-hiam,pyrai2md OpenQP,openqp OpenFOAM,Foam; -parallel; -fileHandler; load openfoam w2dynamics,DMFT.py; cthyb HPL,HPL; xhpl HPCG,HPCG; xhpcg fMRIPrep,fmriprep TURBOMOLE,charmm; load turbomole; ridft CPMD,cpmd.x; cpmd-; .cpmd NAMD,load namd; namd2; namd3 Ansys CFX,cfx5solve Ansys Fluent,fluent Ansys Mechanical,ansys2 Gaussian,GAUSSIAN.; g16; g09 NWChem,nwchem; nwchem_input; nwchem.nw GAMESS,gamess; rungms YAMBO,yambo GROMACS,gmx; mdrun; grompp; pdb2gmx; gmx_mpi; trjconv; g_energy StreaMD,run_gbsa; _streamd Code_Saturne,/bin/code_saturne Walberla,walberla HyTeG,hyteg; /apps/adaptiveRefinement; apps/nlDiffusion MDBench,MDBench ParConnect,parconnect BTDFT,BTDFT.bin; BTDFT.mpifs ARM DDT,/apps/ddt; forge-mpirun; --ddt FeatFloWer,FeatFlower; Feat_FloWer CRYSTAL,CRYSTAL; crystaljob; crystal23; runcrys_batch; CRYSTAL_SCRDIR; CRYSTAL_BIN IGM, activate igm; rgi_id; RGI2000 PETSc, PETSC_DIR; PETSC_ARCH; petscspace Teko, tekoprec; Teko PARDISO, PARDISO; _pardiso EvoStencils, evostencils LigandScout,idbgen; iscreen CA3D, CA3D FD3D, FD3D SCALEXA, scalexa STREAM, stream; triad